Panicum virgatum (switchgrass): 120661407
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Entry
120661407 CDS
T07260
Name
(RefSeq) ras-related protein RABH1b-like
KO
K07893
Ras-related protein Rab-6A
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120661407
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120661407
04031 GTP-binding proteins [BR:
pvir04031
]
120661407
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab GTPases
120661407
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
120661407
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120661407
Exosomal proteins of bladder cancer cells
120661407
GTP-binding proteins [BR:
pvir04031
]
Small (monomeric) G-proteins
Rab Family
Rab6/41 [OT]
120661407
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
SRPRB
RsgA_GTPase
FeoB_N
ATP_bind_1
TIR_2
AAA_7
FabMG
B12-binding
Motif
Other DBs
NCBI-GeneID:
120661407
NCBI-ProteinID:
XP_039796197
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All DBs
Position
2N:58851403..58855400
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AA seq
208 aa
AA seq
DB search
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLV
GNKTDLVDKRQVSIEEGEGKANDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK
QEDMVDVNLRSGNANSSQSQAQAGGCSC
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgtgtcggcgctcgccaagtacaagctcgtgttccttggggaccagtccgtc
ggcaagaccagcatcatcacccgcttcatgtacgacaagttcgacaacacctaccaggct
acaattggtattgatttcctgtcgaagacaatgtaccttgaagatagaaccgtgagactc
caactctgggatactgctggacaggaaagattcaggagtttaattccaagctatatcaga
gactcttcagttgctgtcattgtattcgatgttgcaagcaggcagtctttcttaaataca
tcaaaatggatagaggaagttcgcactgagaggggcagtgatgttatcattgtgcttgtt
gggaacaaaactgaccttgttgacaagaggcaagtctcaatagaggaaggggaaggcaag
gcaaatgaccttggtgtgatgtttatcgaaaccagtgctaaagctgggtttaacattaag
gctctgttccgcaagattgcggctgcgcttcctgggatggagaccctctcatcagcgaag
caggaagacatggttgatgtgaacttgaggtccggcaatgcgaactcatcccagtctcag
gctcaggctgggggatgcagttgttag
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