Panicum virgatum (switchgrass): 120661425
Help
Entry
120661425 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 19-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120661425
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120661425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Microp_apicomplexa_18
Pex24p
Motif
Other DBs
NCBI-GeneID:
120661425
NCBI-ProteinID:
XP_039796228
LinkDB
All DBs
Position
2N:complement(59169772..59178000)
Genome browser
AA seq
566 aa
AA seq
DB search
MLVTPQSHFHTAPRGRLRQRGAAGAAATHRDRGRGCARVISTTAARSLIARRPAAAAAGR
RRAAGHRPLLAVGSSDASQPAGSSSGGPSGEGRMSSAPLLGGGEPERAPSWLGRVVDTEE
ARAQLRFAVPMVLTSMAYYGIPLVSVMFSGHLGDVHLAGATLGNSWATVTGYAFVTGLSG
ALETLCGQAYGARLYRMLGLYLQSSLIMSGAVSVLVSALWCFTEPVLVFLRQDPEVSRAA
ASFVRCQIPGLFAFSFLQCLIRYLQTQSVVAPLVACSVAPFALHVALAHLLVNVLGLGVA
GASAAVSATFWVSCLMLLAYVTRSKAFAETWTGFSVEAFKYVLPTVKLATPSAVMVCLEY
WAFELLVLIAGLLPNSTVSTSLIAMCSSTEAIAYMITFGFSAAVSTRVSNEIGAGNVARA
KNAVSVTLKLSVFLAVSFVALLALGHTQWARLFSGSATIVSEFAAIAPLMAVSIVLDSAQ
GVLSGVARGCGWQHLAAVTNLVAFYFVGMPLAVLLAFKLDLRARGLWAGLICGLACQAAA
LLVITARTRWSDLIDAMREEKANYVA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtaacacctcagtcccatttccacaccgccccccgcgggcgcctcaggcaaaga
ggggccgcgggcgcggctgctacacaccgggaccgaggccgaggctgcgcgcgcgttata
agcaccaccgcggcacgctcgctgatcgcgcgccggccagcagcagcagcggcggggagg
aggcgagccgcgggccatcgtcccttgctcgccgtgggctccagcgacgcgtcgcagccg
gcaggatcctcctccggtggaccgtccggcgagggcagaatgtcttcggccccgctgctc
ggcggcggggagcccgagcgggcgccgtcgtggctggggcgcgtggtggacacggaggag
gcgcgcgcgcagctgcggttcgcggtgccgatggtgctgaccagcatggcctactacggc
atcccgctggtgtcggtgatgttctcgggccacctcggcgacgtccacctcgccggcgcc
acgctcggcaactcctgggccaccgtcaccggctacgccttcgtgacgggcctgagcggc
gccctggagacgctgtgcgggcaggcgtacggcgcgcggctgtaccggatgctgggcctg
tacctgcagtcgtcgctcatcatgtcgggcgccgtctccgtgctcgtctccgcgctgtgg
tgcttcacggagcccgtgctggtgttcctccggcaggacccggaggtgtcccgcgccgcg
gcgtccttcgtccggtgccagatcccgggcctcttcgccttctccttcctccagtgcctg
atccggtacctgcagacgcagtccgtcgtggcgccgctcgtggcctgctccgtggcgccc
ttcgcgctccacgtcgcgctggcgcacctcctggtgaacgtgctcgggctgggcgtcgcg
ggggcctccgccgccgtgtccgccacgttctgggtctcctgcctcatgctgctcgcctac
gtgacgcggtccaaggccttcgccgagacgtggacggggttctccgtcgaggcgttcaag
tacgtgctgccgacggtgaagctcgccacgccgtctgccgtcatggtctgcttggagtac
tgggcgttcgagctcctggtcctgatcgccggcctgctccccaattcgacggtgagcacg
tcgctgatcgccatgtgctctagcacggaggcgatcgcgtacatgatcacgttcgggttc
agcgccgccgtgagcacgcgggtgtcgaacgagatcggcgccgggaacgtggctcgtgcg
aagaacgcggtgtcggtgacgctgaagctgtccgtgttcctggccgtctccttcgtggcg
ctgctggcgttggggcacacccagtgggcgcggctcttcagcgggagcgccaccatcgtg
tcggagttcgcggccatcgcgccgctgatggcggtgtccatcgtgctggactcggcgcag
ggggtgctgtccggggtggccaggggctgcggctggcagcacctggcggcggtcacaaac
ctggtggcgttctacttcgtgggcatgccgctggccgtgctcctcgccttcaagctggac
ctccgcgccaggggcctctgggcggggctcatctgcgggctcgcgtgccaggccgccgcc
ctgctcgtcatcaccgcgcgcaccaggtggtccgacctcatcgacgccatgcgggaggag
aaggccaactacgtcgcctag
DBGET
integrated database retrieval system