KEGG   Panicum virgatum (switchgrass): 120661462
Entry
120661462         CDS       T07260                                 
Name
(RefSeq) DNA polymerase alpha subunit B-like
  KO
K02321  DNA polymerase alpha subunit B
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03030  DNA replication
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120661462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvir03032]
    120661462
DNA replication proteins [BR:pvir03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    120661462
SSDB
Motif
Pfam: DNA_pol_E_B OB_DPOA2 CDC48_N Pol_alpha_B_N
Other DBs
NCBI-GeneID: 120661462
NCBI-ProteinID: XP_039796273
LinkDB
Position
2N:complement(59577914..59583155)
AA seq 628 aa
MEAEIRAEFESSGFSIGGAGPEDAAQILSTLLTYCINYKMSPADLVSNWEVYYLNRQLDG
LKLERSYLDGFLSHLQNEVKERLIEEEANLHVYSSNDVDMLVDNSHADEAAFLDTPGSKQ
EKPPGESSNTELTPLTSDRPSSSRMAKTNGERITPFATRVNKFTQQYVLNSDNAASMPSK
HEAETTEDELIRRIQPSQRCSLEVQRSQPEPGCRFMYDRMEDRFNYLEDRIRKSATLFSA
SGLCGEPADATLASEEKIFAVGMVTCDGEGRLNEKSILLQGSVEHSRGERVRLDLKDLDH
FSLFPGQVVGIEGRNPSGHCFVASKLIDSIPVSVDAQLPSAKKQAVDNGSHPQNSDAGTL
PRALSLVIAAGPYTTTDNLLFEPLQELLSYACRKQPQLLILMGPFIDSDHPDIKKGTVDQ
SFHDIFYSEVLTKIQDFTQYLGNTVRVILIPSVRDAHHDFVFPQPAFDLNLPEDITHQIS
SLANPSLFSSNQIHFGCCTVDILKQISGEEISRKLPGGKPGDRIGRLATHILKQQSYYPL
YPPAGGVPLDFSLAKEALEISSTPDVLLLPSDLAPFVKVLSLGEGNDDQKQFICLNPGRL
AKGIGGGTFVELYYHEDTSRTNASIIRI
NT seq 1887 nt   +upstreamnt  +downstreamnt
atggaggcagagatccgcgccgagttcgagagcagcggcttctccatcgggggcgccggc
cccgaggacgccgcccagatcctctccacgctgctgacctactgcatcaactacaagatg
agccccgcggacctcgtctccaactgggaggtctactacctcaacaggcaattggatggc
ttaaagctcgaaaggtcatatcttgatggttttctttcacaccttcaaaatgaagttaaa
gagaggctaatagaagaagaggccaaccttcatgtgtactccagtaacgatgttgacatg
ctcgttgacaattcacatgcagatgaagcggcatttcttgacacaccaggctctaaacag
gaaaagccacctggagaatcatctaatactgagttgactcctctgacaagcgacagacca
tcatccagcagaatggccaaaacaaatggtgaacgtatcaccccttttgctacacgagta
aataaatttactcaacagtatgttcttaattctgataatgcggccagcatgccaagtaaa
catgaggctgaaaccacagaagatgaactaattagaagaattcagccaagtcaaagatgt
tccttagaagttcagcgctcacagcctgaaccaggttgcaggttcatgtatgacagaatg
gaagacagatttaactacttggaagatcggatacgaaaatcggcaaccttgttttctgca
tctgggttatgtggagaacctgcagatgctacccttgcttcagaggagaaaatttttgca
gtcggcatggttacctgtgatggggaaggtcgtctgaatgaaaaatctatattgctacag
ggcagtgttgagcactcaaggggagagcgtgtgcgccttgacttgaaggatctcgatcac
ttctctttatttcctgggcaggtggtgggtattgaaggccgcaatcccagtggacactgt
tttgttgcatcaaaattgattgattcgataccagtctctgtggatgctcaacttcctagt
gctaagaaacaagctgttgataatggaagccacccccaaaattctgacgctggcactctg
ccaagagcattgtcattggtcatcgcggcaggtccctacacaacaaccgataatctgttg
tttgagcctttgcaagaacttctttcatatgcttgtcgtaagcagcctcaactgctcata
ttgatgggaccctttattgactctgatcatcctgacataaaaaagggaactgttgaccag
tcctttcatgatattttctattctgaagttctgacaaagattcaagactttacccaatat
ttggggaacactgttcgtgtaattctcattccatctgtgcgtgatgctcaccatgacttt
gtcttccctcagcctgcatttgacttgaatttaccagaagatatcacacatcagatttct
tctctggcaaatccaagtttattcagttctaaccagatacattttggctgttgtacggta
gacatcctgaaacagatcagcggtgaggaaatttctcgcaagctacctggtggaaagcct
ggcgacaggattgggcgactagcaacgcacatattaaagcaacaaagctactatcctcta
tatcctcctgctggtggtgtgccattggatttctcacttgctaaggaagccctggagatc
tcatcgactccagatgttctcctgcttccttccgatcttgctccatttgtgaaggtgctc
tcccttggggaaggcaacgatgatcagaaacagtttatttgcttgaaccctgggaggttg
gcaaagggtattggtgggggcacattcgtggagctttactaccatgaggacaccagcagg
acgaatgcctccatcatccgtatatag

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