Panicum virgatum (switchgrass): 120661491
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Entry
120661491 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120661491
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120661491
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120661491
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
SipA
Motif
Other DBs
NCBI-GeneID:
120661491
NCBI-ProteinID:
XP_039796309
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All DBs
Position
2K:complement(3691850..3698821)
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AA seq
1043 aa
AA seq
DB search
MDFYSDDSDPDIDEDLREDLDALRRSCILSGADPDAAVAQVSSACLAGPATPALAAATAP
AAAGGDGLSSDDDDEDLALVRSIRENLHRLNNKASPASPPPPGDAPGDGDPSSSPRPICT
WPPSDTDEDEDDLETLRAIQRRFSHYHSSTSTESPKTMKPEASQGGLSEPFADRNDDEFT
AQKQNAKAPNRTGFPKAALLLLDALKKNRACQKLIRRKLVNIEAKIEENKDLGDRVKCLL
GYQLSCRKSAGRTLSQKEDPRVRLISSRKPTRLSEKNNNRKMPALFLGPAENPHVSKYKM
VLEQFPMSFKKQPWSDVEKDKLARGIKQQYQETLILDSLNNGSAIGDFSAVDMAYALTNA
AGNFEVTPESLRSVLPLINWDKISAMYLPGRSGAECESRWLNCDDPLINREAWTAQEETK
LLLIVQEKGMYNWINIAVTLGTHRTPFQCLVRYQRSLNPHIMNKAWTKEEDLQLQAAVGT
FGEKWQLVSASLDGRTGNQCSNRWRKTLHPTRTRVGRWHMDEDKRLMVCVKLIGSGSWSR
IAPFIPGRTQTQCHERWRNILDPNIDLGKWRPEEDSKLLGAVSEFGPCWSKIALMIPGRN
DNMCSRRWNKLCKHQLPAVKAAIQLKKSVFQTNFVDRAKERPAIAPRDLIALVQSKDDGS
GENTRDRSRKQTKENLAVSNIVDSSTAPDFVAADTVSKTISRRPRKSTGQKSKKQTEENV
AVPDGLNDLSSGCSRSRKRKSTTASNAALQKRMRGSISLDNEAVPIELRGTDSANIEVGT
NRIMDLVSVGEEGVVKKRTRCSKPARGNAAEQNIMAGSIPVGNEAVPVELRGTVSTNNVV
GTNTMMDPVSVGDEGVVKKRTRHSKPAGSEGEGATRKRRCSISADNEVGTNMTKDPVSGE
EGVVKKRTKRSKPVGNEGAARKKMRASVPVGDEGAVKKTGSVATENHGGVTKRKRAPSRR
KSAGDNLTTEDVANASSELGLPSTPSEERVVDAANINKGRRKSTPRPKQIDMSEGDADKH
SPSTRLANCLSFARMKGIDRNTR
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggacttctactccgacgactcggacccggacatcgacgaggacctgcgggaggacctc
gacgcgctgcgccgctcctgcatcctctccggggccgacccggacgccgccgtcgcgcag
gtctcctccgcctgcctcgccgggcccgccacccccgccctcgccgcggcgacggccccg
gccgcggcgggcggcgatggcctctcctcggacgacgacgacgaggacctggccctcgtc
cgcagcatccgcgagaacctccaccgcctcaacaacaaggcctcgccggcctccccgccg
ccgccgggcgacgccccgggggacggcgacccctcctcctcgccacgcccgatctgcacg
tggccgccgtccgacacggacgaggacgaggacgacctcgagacgctccgcgctatccag
cgccgcttctcgcactaccactcaagtacctctaccgagtcaccaaagacaatgaaacct
gaggcatcacagggagggctcagtgaaccttttgcggacaggaacgatgacgagtttact
gcacagaagcagaatgcaaaggctcctaatcgaactgggttcccaaaagctgcactatta
ttactggatgctctaaagaagaacagagcatgccagaagctaattagaagaaaattggta
aacattgaagcgaaaattgaagaaaataaggatcttggggatcgtgtaaaatgtcttttg
ggttaccagttaagctgccgaaaatcagccggcagaactttaagccagaaggaggatcct
cgtgtcagattgatttcttctcggaaaccaactcgtctgtctgaaaagaataataacaga
aagatgccagcactatttcttgggccagctgagaacccccatgtttcaaagtataaaatg
gtgctggagcaattcccgatgtcatttaagaagcaaccatggtcagatgtggagaaagat
aaacttgccagaggaataaagcagcaatatcaagaaacattgattttggactcgctgaat
aatggaagtgccattggtgacttcagtgctgttgatatggcatatgcactgacgaatgct
gctggtaattttgaggtgactccagaaagtcttagatcggtacttccactaataaactgg
gataaaatttctgctatgtacctgcctggtcgatctggtgctgaatgcgaatcgaggtgg
ctaaactgtgatgatccattgattaaccgtgaagcctggactgcgcaggaggaaacaaaa
cttctactaattgttcaagaaaagggaatgtacaactggattaacatagcagttacattg
ggcactcaccggactcctttccagtgtcttgttcgttaccaacgaagtcttaatccccac
ataatgaacaaggcttggacaaaggaggaggatcttcaacttcaagctgctgttgggacc
tttggtgagaagtggcaacttgtatcagctagcctggatggtcgcactggcaatcagtgc
tctaataggtggaggaaaaccttgcaccctacaaggacaagagtgggaagatggcatatg
gatgaggacaaacgcctcatggtttgtgtcaagctaattggatctggcagctggagtagg
attgctccatttattcctggccgcacacaaactcaatgccatgagaggtggcgtaatatt
cttgatccaaatatagatcttgggaaatggcggcctgaggaagattcaaagttattgggt
gcagtatctgagtttgggccttgctggtccaagattgctttgatgattcctggccgtaat
gataatatgtgctctagacgatggaataaactttgtaaacatcagctgcctgcagttaaa
gcagccattcaactaaagaagtctgtttttcaaaccaattttgttgatagagcaaaagag
cggcctgccattgcccccagggacctaattgcacttgtgcaatcgaaagatgacggatct
ggcgagaacacaagagatagatccagaaagcaaaccaaagaaaacctagccgtgtccaac
attgtcgacagttcaactgctcctgattttgttgctgccgatactgtttcaaaaacaatt
tcaagaagaccgaggaaatcaacaggacaaaaatcaaaaaagcaaactgaagagaatgtt
gctgtgcctgatggtctcaatgatttatctagcggctgtagcagatccagaaagaggaaa
tctactactgccagcaatgccgctctacaaaagagaatgaggggatctatctctctggac
aatgaggctgttccgattgaattgaggggcactgacagcgctaatattgaggtaggaaca
aatagaataatggaccttgtgtctgttggtgaagagggagtagtcaaaaagagaaccagg
tgttcgaaacctgctagaggtaacgcagctgaacaaaatataatggcaggatctatccct
gtgggtaacgaggctgttccagttgaacttagaggaactgtcagcactaataatgtagta
ggaacaaatacaatgatggaccctgtgtctgttggtgatgagggagtagtcaaaaagaga
acgaggcattcaaaacctgctggcagtgagggggagggggctaccagaaagaggaggtgc
tctatcagcgctgataatgaggtaggaacgaatatgacgaaggaccctgtctctggtgaa
gagggagtagtcaaaaagagaacaaagcgctcaaaacctgttggtaatgagggggctgcc
agaaaaaagatgagggcctctgtccctgttggtgatgaaggcgcagtcaaaaagacgggt
tctgttgccactgaaaatcatggcggtgtgacgaaaaggaagagagcaccatcaaggagg
aaatcagctggagataatttgacgacagaggatgtggcgaatgcttcctctgagttgggc
cttcctagtacaccttctgaagaaagagttgttgatgctgcaaatataaataaagggaga
agaaagtcaaccccaagacccaagcagatagacatgtctgaaggggatgctgataaacac
tccccatccacacgacttgccaattgcctgtcgtttgcccgtatgaaaggaatcgacagg
aacacaagataa
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