Panicum virgatum (switchgrass): 120661509
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Entry
120661509 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120661509 isoform X1
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120661509
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120661509
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120661509
NCBI-ProteinID:
XP_039796330
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Position
2N:60158763..60164687
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AA seq
464 aa
AA seq
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MGRTGDHHAVDGRLEALLSGAGEGGSGPWLRRMAAAAALELRLLAPLAVPAVVVYMLLIV
MSSTTQIVCGHLGNVQLAAASLGNNGIQVFAYGLMVRTQRCNATNSTTPTVCVRIPVRTP
ICIYTVQLYVRTRAARDGQRGGDAVRAGVRRREVRDAGRVPAALDGAAHGHRRAARRHVR
LLGAAAAAARPVAGDRRRRHGVRVRPHPADLRVRRQLPHPEVPAGAEHRGAQRLHPRGQL
RAPRAAQLNRRVRAGPGPARGLAHAQPHVVAPRPGPVRVHRVEPAVQGDLGRVHLGRLRR
PAGVRRPFHRVGGDVGARGLVLPGAHPPRRHAAGPAGRARRAHCLHFDPGMGVHGLCGLQ
CSCQVTSSCISASHYISHLLGTYFLKRKKNAAYYGYNMHLASLLLHVLTDRNHTENETVH
SALPHRTVRTHVFTLQQFSAASYDVAKLTCPNCVIKLGIQFHLP
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggacgggtgaccaccacgccgtcgacggccggctagaggcgctgctctccggc
gccggcgagggcggctccgggccatggctccggcgcatggcggcggcggcggcgctggag
ctgcggctgctggcgcccctcgccgtgccagccgtggtggtctacatgctcctcatcgtc
atgtcgtccaccacgcagatcgtctgcggccatctcggcaacgtccagctcgccgccgcc
tccctcggcaacaacggcatccaggtcttcgcctacggcctcatggtacgcacgcaacgc
tgcaacgcaacgaactctactactccaacagtctgcgtacgtattcctgtacgcacaccc
atatgtatatatactgtacagctctacgtacgcacacgtgcagctcgggatgggcagcgc
ggtggagacgctgtgcgggcaggcgttcggcgccgagaagtacgagatgctgggcgtgta
cctgcagcgctcgacggtgctgctcatggccaccggcgtgccgctcgccgccatgtacgc
cttctcggagccgctgctgctgctgctcggccagtcgccggagatcgccggcgccgccac
ggagttcgcgtacggcctcaccccgcagatcttcgcgtacgccgccaacttccccatcca
gaagttcctgcaggcgcagagcatcgtggcgcccagcgcctacatcctcgcggccagctt
cgcgctccacgtgccgctcagctgaatcgccgtgtacgtgctgggcctgggcctgctcgg
ggcctcgctcacgctcagcctcacgtggtggctcctcgtcctgggccagttcgcgtacat
cgtgtggagcccgcggtgcagggagacttgggccgggttcacctgggccgccttcgccga
cctgccggggttcgccggcctttccatcgcgtcggcggtgatgttggcgctcgaggtctg
gtacttccaggtgctcatcctcctcgccggcatgctgccggacccgcaggtcgcgctcga
cgcgctcactgtctgcacttcgatccaggcatgggtgttcatggtctctgtgggcttcaa
tgcagctgccaggttacttcatcctgcatcagtgcgtctcactatatttctcacctgttg
gggacatattttctcaaaaggaaaaaaaatgcagcatattatgggtacaatatgcactta
gcgagtctcctgctccatgtcctaaccgacagaaaccacaccgaaaatgaaacagtacat
tctgcattacctcaccgtacagtacggacacatgtcttcactcttcagcagttcagcgca
gcttcctacgatgttgccaaactcacatgtcctaactgcgtcatcaaactaggcattcag
ttccatcttccatag
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