Panicum virgatum (switchgrass): 120661517
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Entry
120661517 CDS
T07260
Name
(RefSeq) abnormal spindle-like microcephaly-associated protein homolog isoform X1
KO
K16743
abnormal spindle-like microcephaly-associated protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120661517
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
120661517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IQ
CH
Phage_C
Motif
Other DBs
NCBI-GeneID:
120661517
NCBI-ProteinID:
XP_039796342
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All DBs
Position
2N:complement(60209829..60220959)
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AA seq
1442 aa
AA seq
DB search
MSRREPAASPFRDLSNLRTPRPNPKHVPASPTFFTASKTPLQAPTPTPLRLRRPGDGAPT
PTPLGRRLRALEVDQSRSARRAESGRERALRSFAASASSWLSLLLRDPAACGCSPAATGT
AAAAQPCAAGERDALGGDRARGVRSPKRRRGGGDRGGEKRKEMTPAMIAALRDSLREVCS
LDDVTERMGRYMSKGACEEVLVMIFQVCKSIDEGRLKMKAQCPLVTDLRLKEKATRIFMC
YNPDWLRIGLHIVHGGDSLMQCGLGKRDKEVHFLKLILEKQMFSQIMTAKFCAHKKVVEG
HNVQGYSEASGNIILKRIFLFVAALDRAKIESALPLEAGIDGLDGGSPLLFCHQGQVKSS
RQIIQESLGEAMHGEGDLLMHLATMGYKLNYQQPALSEYDFTVRSLFEDLQDGIILCRIV
QLLISDASIILNVIAPSDTKKKRLSNCTTAIRYIKQARVPLSDPDGVTISAEDIITGDKE
LILSLLWNLFIHKQLPLLASTSLSRELTRLGVPLMSMEQRMPENKSHMVLLYDWVQVIRS
KYGITVESSPQFDRRALNCLVNYYLNIDVFPNEETQTGCRKELFTCHELDTLTDITSCPS
SKMGKVFADVLQDIPGSNILADGVLIDEKSAILLLAFLSSHLTNDKRLDQLKNLINMRLH
YESPQTNISARYRSGGKNDVKYQLHQRDNKDGSCTNQEWAATIIQSQTRSFIAKNKYCKR
KKAIFILQGAMKAWSATTLKRNRCPLTAAATTWQAHENYNRYFICIMERNRFVQMRKSAI
IIQQAVRVWIRGRKRLENNEPFERYEFPEGKTPSKTSSIAPSPQEHCSGDDKTIASATSW
QHCEHVDTLKASAAAHILSFDGMDSLGSTASQQLDNKQSNSIISATQPCKSGHESIPRPS
SPLNMFESSCKSTARSQLCEVETPNVISVRKLASEDDMDYSSNISSQAFLEHQQLVSTRI
GLPICKESLTAQRIQSAYRIFLNNRNLRITAAIKIQSHWRCYSVHKCFTRQVQAIVGIQT
SVRLSLCRQACQRNQLSAVLIQRVVRGWLARKRLLGSSSLQTYTRLCVLDQCQQRKCHQS
LELKIVLHSVIRLQRWWRKFLFHQSVRTSVISIQSFVRGWLARKRVNRIVCCINIIQRWW
RKVLFLESRTRAVTIIQTHFRRWVARQDAIKTRNCITTIQRWWRKVLFLKLRRRAVIVIQ
AHFRGWVARQAAFRTRKVVTTIQSFVKAFLVRKASKQEVAHIRSRLQKSSSQVDDSMRLI
NRLVAALSQLRQSRSTHRIRQACTTLSTATEYSKKCCETLVTAGAVDILLKQIHLLNRGI
PDQEILKQVFLTFRNIARYPNLRQVLVNTPESVEIIFQELLRSKSAGFFFIASDVLKKLC
ESKGGHETARALHHHIKMLRNLVQDLEKKVELDKRNGRTGVVKENNLRRLREAATLYHLL
TW
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccgcgagcccgccgcctcccccttccgcgacctctccaacctccgcacccca
agacctaaccccaagcacgtacccgcctccccgaccttcttcaccgcctccaaaactccc
ctccaggctcccacgccgacgccgctccgcctccggaggcccggagacggcgcccctacc
ccgacgcccctcggccgccgcctccgcgcgctcgaggtcgaccaatcgcgctccgcccgc
cgcgccgagtccggccgcgagcgcgcgctccgctcattcgccgcctccgcctcgtcatgg
ctctcgctgctcctccgcgacccagcagcctgcggctgctccccggcggccacgggtacc
gccgcggccgcgcagccctgcgcggcgggcgagcgcgacgctctcggtggagatcgggcg
cgtggggtgcgcagcccgaagcggcgccgcggtggtggtgatcgcggcggggagaagagg
aaggagatgacgccggcgatgattgccgctttacgggattctctgagggaggtgtgcagc
ctggacgatgtcacggagaggatggggaggtatatgagcaagggcgcgtgcgaggaggtg
ctcgtcatgatctttcaagtttgtaagagcattgatgaaggcagactgaagatgaaagca
cagtgcccccttgttactgatcttaggctcaaagagaaagcaactaggattttcatgtgc
tacaatccagattggcttaggattggcttgcatattgttcatggcggtgattccttgatg
cagtgtggattaggaaaacgggacaaggaggttcattttctaaaactaattctggagaag
cagatgttttctcaaatcatgactgcaaagttttgtgcgcacaagaaggtggtagaaggg
cacaatgtacagggttatagtgaagcatcgggcaatatcatactgaaaagaatttttctg
tttgttgctgcactagatagagccaaaatagaaagtgctctacctcttgaagctggaatt
gatggccttgacggtggatcccctctcttattttgtcaccaaggccaagtaaaatctagt
cggcaaatcattcaggagtctttgggggaggccatgcacggagaaggtgaccttctgatg
cacctcgcaactatggggtataaactaaattatcaacagcctgctctatcagaatatgat
ttcactgtaaggagtctatttgaagatctccaagatggcataattctctgtagaattgtt
cagctgctcatctcagatgcatcgatcattttgaatgtgattgctccctcagatacaaaa
aagaagaggttgagtaactgcaccactgctatacgatacatcaagcaagctcgggttcca
ttatctgatcctgatggagtcacaatttctgcagaagacatcattactggggataaggag
cttattctttcattgctgtggaatttattcatccataagcagctgcccttgttagctagc
acatcattatctcgtgaattaaccaggctaggtgtacctttgatgtcaatggaacaacga
atgcctgagaacaaatcacacatggtcttgctttacgattgggttcaggtgatacgctca
aaatatggcataacagttgaaagttcacctcagtttgacaggagagcactgaactgtctc
gtcaactattatttgaacattgatgttttccctaacgaggaaacacaaacaggttgccga
aaggaattgttcacctgtcatgaacttgatactttaactgatatcaccagctgcccatcc
agcaagatgggaaaagtatttgcagatgtacttcaggacattccaggtagtaatatccta
gctgatggtgtattaattgatgagaagagtgccattcttttgctagctttcctatcttca
catctgactaatgacaaaagattggatcaactaaagaatttgatcaatatgaggttgcac
tatgagagcccgcagactaatatttcagcaagatatagatctggaggaaagaatgatgta
aagtaccaactccaccagagagataacaaagatggctcatgtaccaaccaggagtgggct
gcaacaattattcagagtcagactagaagttttattgcaaagaataaatattgcaagcgt
aagaaggcaatatttatcctgcaaggtgctatgaaggcatggtcagccacgaccttgaaa
aggaaccgttgtcctttaactgccgctgccactacttggcaagcacatgaaaactacaac
agatacttcatttgcataatggagaggaatagatttgtgcagatgagaaaatctgccatt
ataattcagcaggctgtaagggtttggattagaggaagaaaaaggctcgagaacaatgag
ccctttgaaagatatgagttcccagaaggtaaaactccatccaaaactagtagcattgct
ccttcccctcaggagcattgcagtggtgatgataaaaccatagcttcagccacttcatgg
cagcactgcgagcatgtggatacattgaaagcttctgctgctgctcatattcttagtttt
gatggcatggacagtctaggttcaaccgcttcacagcagcttgacaacaaacagagcaac
tctataatttctgccactcaaccgtgcaaaagcgggcatgaatctatacctcgtcccagt
tctccattgaatatgtttgagagtagctgtaaaagtacagctagatctcagttgtgtgaa
gttgagactcccaacgtaatttctgtacgtaagcttgcaagtgaggatgatatggattat
agcagtaatatttcttctcaagcattcttagagcaccaacagcttgtatctacccggatt
ggtttacctatttgcaaggaatcactgactgctcagaggatacaatctgcatatagaata
ttcttgaacaacagaaacttaaggataactgctgcaattaaaatccagagccattggcgg
tgttattcagtacacaagtgcttcacaaggcaagttcaggctattgtaggaatccagacc
tcagtaagattgtccttgtgccgtcaggcttgtcagcgcaaccaactctccgcagtactg
attcagcgagttgtcagaggatggttagctagaaagagactgttaggttcttcttcgctc
caaacctacacaagactttgtgtacttgaccaatgtcaacagagaaaatgtcatcaaagc
cttgagttgaagattgtgctgcattcagtcataaggctacaaagatggtggaggaagttc
ctgttccatcagtctgtacgaacatctgtgatctcaattcaatcttttgtccgtggctgg
ctggcacggaaacgagtaaatcgtattgtatgctgcatcaacatcattcaaagatggtgg
cgaaaggttttattccttgaatcgaggacgcgagctgtgactattatccagactcatttc
cgtcgttgggtcgcacgacaagatgctattaaaactagaaactgtattaccacaatacag
agatggtggagaaaggttttgttccttaaattgaggaggcgagctgtgattgttatccag
gctcatttccgtggttgggtagcacgacaagctgcttttagaactagaaaagtcgttact
acaatacagtcatttgtcaaagccttccttgtgcggaaagcttcgaagcaagaagttgct
catataagatcaagactgcagaagtcttcttcacaagttgatgatagtatgcgcctgatc
aacagattggtggctgcactgtcgcagcttcgtcagtctaggagcacacacagaattaga
caagcttgcactacattgagtacggctacagaatattcgaagaaatgctgcgagacacta
gtcactgctggagccgtagacatattgctgaagcaaatccacttgctgaaccgtgggatt
cctgaccaggaaatcttgaagcaagtgttccttactttcaggaacattgcacgctatcca
aatcttagacaggtgttggtcaacactccagaatctgttgaaatcatcttccaggaatta
ctgaggagcaaatcagctgggttcttcttcatcgcgtcagatgttctgaagaagttatgt
gaatccaagggaggccatgaaaccgcccgggcgctgcatcaccacatcaaaatgctgcga
aatctggtgcaagacctggaaaagaaggtggaactcgacaagaggaatggccgcactgga
gttgtgaaggagaacaatctacggcggcttcgggaggctgccacgctctatcatctcctc
acttggtga
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