Panicum virgatum (switchgrass): 120661596
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Entry
120661596 CDS
T07260
Name
(RefSeq) chitin-inducible gibberellin-responsive protein 1 isoform X1
KO
K27748
scarecrow-like transcription factor PAT
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120661596
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
GRAS
120661596
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAS
UFL1
Motif
Other DBs
NCBI-GeneID:
120661596
NCBI-ProteinID:
XP_039796417
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All DBs
Position
2N:61164439..61168770
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AA seq
569 aa
AA seq
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MDLHQVLKYRLTGANIFYEFPTENNLANTPWPATPLKSEFSNSPYTPLSAQLECDNLSAI
SNTPDNQSSTETISAQPISPLEVDSSYRQSGILRENTQVRPDQLYTTSRHNMQHALREIE
TVLMAPDADDAANSTKHEFEEHKPTQLMRQRSRTWSESRQPSPGIVRTQFGSGYPTASYD
FRPEKRQRELREDPQSMVKQLLTKCAEALSEERIDEFLKLVQQARGVVSITGEPIQRLGA
YLLEGLVARHGNSGTNIYRALKCREPESNELLSYMKILYSICPYFKFGYMAANGAIAEAL
RNEDKIHIIDFQIAQGTQWITLIQALAARPGGPPHVRITGIDDPVSEYARGEGLDLVGKM
LKSMSEEFRIPLEFTPLPGVYATRVTKEMLDIRPGEALAVNFTLQLHHTPDESVDVNNPR
DGLLRMVKGLSPKVTTLVEQESHTNTTPFLMRFSETMDYYSAMFESIDTNLPRDSKERIN
VEQHCLAKDIVNIIACEGKDRVERHELLGKWKSRLTMAGFKPYSLSSYVNSVIRKLLACY
SDKYTLEEKDGAMLLGWKNRKLISASAWH
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggacttgcaccaggtattaaagtacagattaactggtgctaacatcttctacgagttt
cctacagaaaacaacttagcaaacactccctggccagctacgcccctgaagtccgagttc
agtaactccccatacactcctctttcagcccagcttgagtgtgacaatttgtctgctatt
agcaacactccagataatcagagctccacagaaaccatttcagcacaaccaatatcacca
ctggaagttgacagttcatacagacagtcaggcatccttcgagaaaacacccaagtgaga
cctgatcaattgtacacaacatcaagacataatatgcaacacgctttacgggaaatagag
actgttctgatggctcctgatgctgatgatgcagccaatagcaccaagcatgagtttgag
gaacacaaacctactcagttgatgaggcagcggtcaaggacatggagtgaatcaagacag
ccatcaccaggaattgtccgcacacaatttggatctggataccccacagcaagctatgac
ttccgcccagaaaagcggcaaagggagttaagggaggatccgcagagcatggtgaagcag
ctattaaccaagtgtgctgaagcattaagtgaggagaggatagatgagttcctcaagctt
gttcagcaagctcgcggagttgtatcaattactggggagccaatacagcggttaggtgct
taccttcttgagggtttggttgctagacatggaaactcgggtacgaacatatatcgtgct
ctgaagtgccgtgagccggagagtaatgaacttttgtcctacatgaagattttatacagt
atctgtccgtacttcaagtttggctatatggctgccaatggggcaattgcagaggcattg
agaaatgaggacaaaatccatataattgatttccagattgctcaggggacacaatggata
acactgatccaagcactagctgcaaggcctgggggtcctccacatgtgcggatcactgga
atagatgatccagtgtcagagtacgctcgtggtgaaggtctggaccttgtagggaagatg
ttgaagagcatgtccgaagaattcaggataccattggagtttacccctctacctggtgtc
tatgccactcgagtcacaaaagaaatgctagacatcaggccaggcgaagcacttgctgtc
aacttcactctgcagctacaccacacaccagatgagagcgtggacgtcaacaacccacgg
gatgggctactccggatggtgaaaggactgtccccgaaggtgaccacactggtggagcag
gagtcgcacaccaacacaacaccattcctgatgaggttcagcgagactatggactactac
tcggccatgtttgagtcaatcgacacgaacctgccacgggacagcaaggagaggataaat
gtggagcagcactgccttgccaaggacattgtgaacattatcgcctgtgaggggaaggac
cgtgtggagcggcatgagctcctaggcaagtggaagtcgaggctgaccatggctgggttc
aagccgtactcgctaagctcgtatgtgaactcggtgatcaggaagctcctcgcgtgctat
tctgacaagtacaccctggaagagaaggacggcgcgatgctgctcggctggaagaatagg
aaattgatatcagcttctgcgtggcactga
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