KEGG   Panicum virgatum (switchgrass): 120661628
Entry
120661628         CDS       T07260                                 
Name
(RefSeq) SKP1-like protein 11
  KO
K03094  S-phase kinase-associated protein 1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03083  Polycomb repressive complex
pvir04120  Ubiquitin mediated proteolysis
pvir04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120661628
   04120 Ubiquitin mediated proteolysis
    120661628
  09126 Chromosome
   03083 Polycomb repressive complex
    120661628
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120661628
   04121 Ubiquitin system [BR:pvir04121]
    120661628
   03036 Chromosome and associated proteins [BR:pvir03036]
    120661628
Membrane trafficking [BR:pvir04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    120661628
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     120661628
   Cul7 complex
     120661628
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     120661628
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     120661628
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 120661628
NCBI-ProteinID: XP_039796469
LinkDB
Position
2N:61521043..61521829
AA seq 169 aa
MASAGSVDETAAAATATATGTILLISSDGERFEVPEEASNLSETIRHMIEDGCTEGGVPV
PNVTGRILAKVLEYCNKHAADAESNKEELDKFDKAFVDEVKADQATLFDLILAANYLNVK
GLLDLTCQTVADMIKGKSVEEIRQTFNIKNDFTPEEEAEIRKENQWAFD
NT seq 510 nt   +upstreamnt  +downstreamnt
atggcatcggcgggttccgtcgacgagacggcggccgcggccacagccacggccaccggc
acgatcttgctcatcagctcggacggcgagcgcttcgaggtgccggaggaggcgtcgaac
ctgtccgagaccatccgccacatgatcgaggacggctgcaccgagggcggcgtcccggtc
cccaacgtcaccggcaggatcctcgccaaggtcctcgagtactgcaacaagcacgccgcc
gacgccgagtcgaacaaggaggagctggacaagttcgacaaggcgttcgtcgacgaggtg
aaggccgaccaggccacgctgttcgacctcatcctggccgccaactacctcaacgtcaag
gggctgctggacctcacctgccagacggtcgccgacatgatcaagggcaagtcggtcgag
gagatccggcagaccttcaacatcaagaacgacttcacgccggaggaggaggcggagatc
cgcaaggagaatcagtgggccttcgattag

DBGET integrated database retrieval system