Panicum virgatum (switchgrass): 120661680
Help
Entry
120661680 CDS
T07260
Name
(RefSeq) chlorophyll a-b binding protein of LHCII type III, chloroplastic-like
KO
K08914
light-harvesting complex II chlorophyll a/b binding protein 3
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00196
Photosynthesis - antenna proteins
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
120661680
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
pvir00194
]
120661680
Photosynthesis proteins [BR:
pvir00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
120661680
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chloroa_b-bind
HliA
Motif
Other DBs
NCBI-GeneID:
120661680
NCBI-ProteinID:
XP_039796526
LinkDB
All DBs
Position
2N:62166792..62168167
Genome browser
AA seq
268 aa
AA seq
DB search
MASTIMAATSRVLAAKTPFLGQGRAAANASPLRDVAAAASGRITMGNDLWYGPDRVKYLG
PFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLE
KWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRING
LDGVGEGNNLYPGGQYFDPLGLADDPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
PLENLLDHLDDPVANNAWVYATKFAPGS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgatcatggccgccacctcccgcgtcctcgccgccaagaccccgttcctc
ggccagggccgcgccgccgccaatgccagcccgctccgcgacgtcgccgcagccgccagc
ggccggatcaccatgggcaacgacctgtggtacgggcccgaccgcgtcaagtacctgggc
cccttctccgcccagacgccctcctacctcaccggcgagttccccggcgactacggctgg
gacacggccgggctctccgccgacccggaggcgttcgcgcgcaacagggcgctggaggtg
atccacgggcggtgggcgatgctgggcgcgctgggatgcatcaccccggaggtgctcgag
aagtgggtgcgcgtggacttcaaggagcccgtctggttcaaggccggcgcgcagatcttc
tccgagggcgggctcgactacctgggcaaccccaacctggtgcacgcgcagagcattctc
gccgtgctcggattccaggtcatcctcatgggcctcgtcgagggcttccgcatcaacggc
ctcgacggcgtcggcgagggcaacaacctctaccccggcggccagtacttcgaccccctg
ggcctcgccgacgaccccatcaccttcgctgagctcaaggtcaaggagatcaagaacggc
cgcctcgccatgttctccatgttcggattcttcgtgcaggccatcgtcaccggcaagggg
cccctcgagaacctgctcgaccacctcgacgaccccgtcgccaacaacgcctgggtctac
gccaccaagttcgcgcccgggtcttaa
DBGET
integrated database retrieval system
