Panicum virgatum (switchgrass): 120661687
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Entry
120661687 CDS
T07260
Name
(RefSeq) protein FAR1-RELATED SEQUENCE 5-like isoform X1
KO
K17604
zinc finger SWIM domain-containing protein 3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120661687
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120661687
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GFIT
Motif
Pfam:
FAR1
MULE
SWIM
ZSWIM1-3_RNaseH-like
Transposase_mut
Motif
Other DBs
NCBI-GeneID:
120661687
NCBI-ProteinID:
XP_039796533
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Position
2N:62240337..62244489
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AA seq
903 aa
AA seq
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MPSAPGEKNPQDAPGPATAPPLVQALRPVDGTGSSTIDLRLAQQSWPGNVVLLRPCVPWP
PQVPVQLLLNPANPQKNADAMVDVAAADVNPAIDSCDDNMLPKMNMLFDGENDAYEFYNA
YAEKVGFFVRRSTLWTTSKNIITRRTFVCSREGFREKKKGAKEAKCPRPETRIGCPASLT
IRLTANGKYRLTEFVPNHNHQLATASTIHMLKAKKIRRKARAVRENLVDDTVSTPEFENE
DEAYEFYSMYAGKIGFNVRRASMTVNTENVITRRMFVCSKEGFREKKRGVKRVKKPRPET
RTGCPACMVIRLGTNGKYQVTEFVTFHNHQLGAAAASDLVMASQSTENDQDDGVDLADRS
PDDSVHKQNLINESVTINFLEGRSCKRYKCTKTPHYGDVGATLEYLQRMQHDNPSFFYAV
KSDENGNFTNFFWADSKSIIDFVYFGDVVCFDSGYALQRYGRPLALFTGLNHHKQTVIFG
AALLYDESNEAFRWLLDTFNMAMNGTHPKTLLTDRSAAISEAVAATLPATAHRYCVWQIY
QHALQQLSQAFQGSKTLEGNFKRCLFDCEDEEEFLTAWKEMLEKYDLEDNQWLADLFSIK
EKWALPYGRDAFYADMKSVQQKESLTSELKKHLSLEYGLLNFFEHFEKLLCDRRSAELEF
DVNANQSTKKPPSMRMLRQAANVYTPAAFKMFEREFELYMDCMLYSCGEMGTIFEYRISV
EDNPKDHFVKFNSRNSMMNCTCKTFEFIGIPCRHMLKVLDTRNIKDLPVQYIVKRWRKDA
KSGSSNSGCAFSFDGDPESAHTKCYNLLCRIFSIAAARAATSAESFTYMENQSNILMDQV
EQVIQTRPPDIVDLIGANCDRTQNSVDNIVTEGIHSHTNFLNGSADGSLTFPFTLGAGAL
DYR
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggcacctggggagaagaatccccaagatgctccggggcctgcgactgcacct
ccgctggtgcaggctctcaggcctgtcgatggcacaggcagttccaccatagacctgagg
ctagcgcagcagtcttggcccggcaatgtagtgctcctgcgcccttgcgtgccctggcct
cctcaggtgcctgtccagctgctgcttaatcctgcaaatccacagaaaaatgcagatgct
atggttgatgtggctgcagcagatgttaaccctgcaatcgatagctgtgatgataatatg
ttgcccaagatgaatatgctgttcgatggcgagaatgatgcgtatgagttctacaatgcg
tatgcggagaaggtgggcttctttgtccggaggtcaacgctctggacaacctcaaagaac
ataatcactaggagaacttttgtttgctcaagagagggtttccgggaaaagaagaagggg
gccaaggaagcaaagtgcccacgccctgaaacaagaattgggtgccctgcgagcttgacc
attagacttactgctaacggcaagtatcgtttgacagagtttgtaccgaatcataaccat
cagctggcaacggcatctacaattcatatgctcaaagcaaagaaaatcaggcgcaaagca
cgggctgtgagagaaaatctggtcgatgatactgttagtacgccagaatttgaaaatgaa
gatgaggcatatgaattttacagcatgtatgcaggaaaaattgggttcaatgtgcgaagg
gctagcatgacagtgaatactgagaatgttataaccagaagaatgtttgtttgttcgaaa
gagggtttccgtgagaagaaaagaggagtgaaaagagtaaagaagcctcgaccggagaca
cgaactggctgtccggcatgtatggtcatcaggcttggaactaatggcaaatatcaagtc
acagaatttgttacctttcataatcaccagcttggggctgcagcagcgtctgatctcgtc
atggcatctcagagtacagaaaatgatcaagatgatggagttgatctggcagatagatca
cctgatgattctgttcacaagcaaaatcttattaatgaaagtgtcactataaatttccta
gaaggtagaagttgcaaaagatacaagtgtacaaagactccacactatggtgatgttggt
gctactctagagtaccttcaaaggatgcaacatgataacccttcattcttctatgctgta
aaatctgatgagaatgggaactttacaaattttttctgggcggattcaaagtctattatt
gattttgtctatttcggtgatgtagtatgttttgattcaggatatgcattgcaacgctat
ggcaggccacttgctttgtttacaggtttgaatcatcataagcaaacagttatctttggt
gctgcattactttatgatgaaagtaatgaggctttcagatggttattagatactttcaac
atggcaatgaatggaacacatccgaagacattgttaactgatagatctgctgcaataagt
gaagctgttgcggccacattgcctgctacagcccatcgttattgtgtgtggcaaatttac
caacatgctcttcagcagttgagtcaagctttccagggttcaaaaactctagaaggcaac
ttcaagagatgtctatttgattgtgaggatgaggaggagtttttgacagcatggaaggaa
atgttggaaaagtatgacctagaagataatcaatggctagcagatttgttctcaattaag
gagaaatgggcactgccatatggccgtgatgcattttatgctgatatgaaaagtgtccag
cagaaggaaagcttgacgagtgagttgaaaaaacatttaagcttggaatatggcctttta
aacttctttgagcactttgaaaaactgttatgtgatcgtcgatctgcagagctggaattt
gatgtgaatgctaaccagagcacaaagaagccaccatctatgcgaatgttaaggcaagct
gccaatgtatatacacctgctgcctttaaaatgtttgagagggaatttgaattatacatg
gattgcatgctttacagctgtggtgagatgggaacaattttcgagtacaggataagtgtt
gaagacaatccaaaagatcattttgttaaattcaattcgcgcaattccatgatgaattgt
acttgtaagacgtttgagtttattggcatcccatgtcgccatatgctgaaggtacttgac
acaaggaatatcaaggaccttcctgttcagtatatcgtgaaaaggtggaggaaggatgcc
aaatcaggatcttcaaatagtggttgcgctttctcatttgatggtgatcctgagtctgct
catacgaaatgttacaatttactgtgtcgcatattcagcatagcagcggctagggctgca
acctctgcagaatcattcacatatatggaaaaccagtcaaacatactgatggatcaagta
gagcaagttattcaaaccaggccgcctgacattgttgaccttattggtgctaactgtgac
cgaactcaaaattcagttgacaatattgtcactgaaggcattcacagtcatactaatttt
cttaatggctccgctgatggctctctaacatttccgttcacattgggtgctggcgcattg
gattaccgctga
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