Panicum virgatum (switchgrass): 120661720
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Entry
120661720 CDS
T07260
Name
(RefSeq) calcium-dependent protein kinase 20
KO
K13412
calcium-dependent protein kinase [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120661720
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120661720
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120661720
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120661720
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CAMK group
CDPK family
120661720
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
EF-hand_7
EF-hand_1
PK_Tyr_Ser-Thr
EF-hand_5
EF-hand_6
EF-hand_8
Kinase-like
SPARC_Ca_bdg
ABC1
Kdo
AIF-1
APH
RIO1
Motif
Other DBs
NCBI-GeneID:
120661720
NCBI-ProteinID:
XP_039796574
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Position
2N:complement(62610670..62614378)
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AA seq
542 aa
AA seq
DB search
MGNCCVTAGGAAGEGGGKTKKPKEPKQKKGKKPNPFSIEYNRSAPPGAAPRLVVLREPTG
RDIAARYELGGELGRGEFGVTYLCTDRDSGEALACKSISKKKLRTPVDVEDVRREVEIMR
HLPKHPNIVTLRDTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAALVTRTIVEVVQ
MCHKHGVMHRDLKPENFLFANKKETAALKAIDFGLSVFFTPGERFTEIVGSPYYMAPEVL
KRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPRVSDNAKD
LVRGMLNPDPKRRLTAQQVLDHPWLQNIKKAPNVNLGETVKARLQQFSVMNKFKKHALRV
IAEHLSVEEAADIKDMFEKMDLNKDQMLSFDELKLGLHKFGHQMPDADVQILMEAADADG
NGSLDYGEFVTLSVHLRKIGNDEHLHKAFAYFDRNQSGYIEIDELRESLADDLGQNHEEV
INAIIRDVDTDKDGKISYDEFAAMMKAGTDWRKASRQYSRERFTSLSLKLQKDGSLQMTS
TQ
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgggcaactgctgcgtgacggcggggggagccgccggtgagggcggcggcaagaccaag
aagcccaaggagccgaagcagaagaagggcaagaagccgaaccccttctcgatcgagtac
aaccgctccgcgccgccgggcgccgcgccgcggctggtggtgctgcgggagcccacgggg
cgggacatcgcggcgcggtacgagctgggcggggagctcgggcgcggcgagttcggggtc
acatacctctgcacggaccgcgactccggggaggcgctggcctgcaagtccatctccaag
aagaagctccgcacccccgtcgacgtcgaggacgtgcgccgggaggtggagatcatgcgc
cacctccccaagcaccccaacatcgtcacgctcagggatacgtacgaggacgacaatgcc
gtgcacctcgtcatggagctctgcgagggcggggagctcttcgaccggatcgtggcgcgg
gggcactacacagagcgcgccgccgccttggtcacgcgcaccatcgtcgaggtcgtgcag
atgtgccataagcatggagtgatgcacagggatctcaaaccagagaatttcttgtttgca
aacaagaaagaaacagcggccctaaaagcaattgattttggcctgtctgtatttttcact
ccaggcgaacgattcactgagattgtcggaagcccttattacatggctccagaggtgcta
aagaggaactacggcccagaagttgatgtttggagtgcaggagtgattctttacattctt
ctttgtggcgtccctccattctgggcagaaaccgaacagggtgttgctcaagcaattatc
cgttctgtcattgattttaaaagagacccatggccaagggtctcagataatgcaaaagat
cttgtcaggggaatgctcaatccagatccaaaacgacgattaacagctcagcaagtgctc
gatcacccatggttacagaacattaagaaggctccaaatgtcaatttgggtgaaactgtt
aaggctagactacaacagttctctgtgatgaacaagttcaagaagcatgcacttagggtc
atagctgaacatctttcagtagaagaggctgctgacataaaggacatgtttgaaaagatg
gatcttaacaaggatcaaatgcttagttttgatgaactgaagcttggtctgcataagttt
ggtcaccaaatgcctgatgctgatgtccaaatactaatggaagctgcggatgctgatgga
aatggatccttggattatggagaatttgttacattatctgtccacctaagaaagattggc
aatgatgagcatctgcataaggcatttgcgtactttgaccggaaccagagtgggtatatt
gaaatcgatgaactccgtgagtcattagctgatgacctgggacaaaatcacgaggaagtt
atcaatgccattatccgtgatgtagacactgataaggatggcaagatcagctacgatgag
tttgcggcgatgatgaaggctggaacggactggaggaaagcctcaagacagtactcaaga
gagcggttcaccagcctgagcctaaagctgcaaaaggacggatcattgcagatgacaagt
acccaatag
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