KEGG   Panicum virgatum (switchgrass): 120661763
Entry
120661763         CDS       T07260                                 
Name
(RefSeq) tubulin alpha-3 chain-like
  KO
K07374  tubulin alpha
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04145  Phagosome
pvir04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120661763
  09142 Cell motility
   04814 Motor proteins
    120661763
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvir03019]
    120661763
   03036 Chromosome and associated proteins [BR:pvir03036]
    120661763
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pvir04812]
    120661763
   04147 Exosome [BR:pvir04147]
    120661763
Messenger RNA biogenesis [BR:pvir03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     120661763
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     120661763
Cytoskeleton proteins [BR:pvir04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    120661763
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120661763
  Exosomal proteins of other body fluids (saliva and urine)
   120661763
  Exosomal proteins of colorectal cancer cells
   120661763
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 120661763
NCBI-ProteinID: XP_039796636
LinkDB
Position
2N:63132883..63136333
AA seq 450 aa
MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTSVGVAHDAFNTFFSETGSGK
HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT
SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGADDEGDEGEDY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgagagagatcatcagcatccacatcggccaggccgggatccaggtcggcaacgcctgc
tgggagctctactgcctcgagcacggcatcgagcccgatggcaccatgcccagtgatacc
tcggttggcgttgcacatgatgccttcaacaccttcttcagcgagaccggttctggcaag
catgtgccgagggctatctttgtcgatcttgagcccactgtcatcgacgaggtgcgcact
ggctcgtaccgccagctcttccatccagagcagctcatctccgggaaggaggatgcggct
aacaactttgcccgtggccactacactgttgggaaggagattgtcgatctatgccttgac
cgtgttcgcaagctagcagacaattgcactgggctgcagggattcttggtcttcaatgct
gttggtggtggtactggttctggacttggttcactcctgttggagcgcctctcagttgat
tatggcaagaagtccaagctcgggttcaccatctatccttccccacaggtgtcaacagct
gttgtagagccatacaacagtgtcctctcgacccactccttgcttgagcacacagatgtt
gcagtcctcctggacaatgaggctatctatgacatatgccggaggtcccttgacattgaa
aggccaacctatactaacttgaacaggctgatctcacagatcatatcttcgcttaccacc
tccctgaggtttgatggcgctatcaacgtggatgttacagagttccagaccaaccttgtt
ccatacccacgtatccatttcatgctttcatcatatgcccccgttatctctgctgagaag
gcctaccatgagcagctctctgtgcctgaaatcaccaatgctgtctttgagccctcaagc
atgatggccaagtgtgacccaaggcatgggaagtacatggcttgctgcttgatgtaccgt
ggtgatgtagttccgaaggatgtcaatgctgcagttgcaaccatcaagaccaagcgaact
gtccagtttgtggactggtgccccactggtttcaagtgtggcatcaactaccagccaccc
actgttgtccctggaggcgacctggcaaaggtccagcgtgccgtgtgcatgatcagcaac
aacacagccgttgccgaggtgttctctcgcatcgaccacaagttcgacctgatgtacgcc
aagcgtgcgttcgtgcactggtacgttggtgagggtatggaggaaggcgagttctcggag
gcccgtgaggacttggctgcccttgagaaggactacgaggaggttggcgcagagggcgcg
gatgatgaaggcgacgagggagaagactattga

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