Panicum virgatum (switchgrass): 120661763
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Entry
120661763 CDS
T07260
Name
(RefSeq) tubulin alpha-3 chain-like
KO
K07374
tubulin alpha
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04145
Phagosome
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120661763
09142 Cell motility
04814 Motor proteins
120661763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120661763
03036 Chromosome and associated proteins [BR:
pvir03036
]
120661763
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120661763
04147 Exosome [BR:
pvir04147
]
120661763
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120661763
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
120661763
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
120661763
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120661763
Exosomal proteins of other body fluids (saliva and urine)
120661763
Exosomal proteins of colorectal cancer cells
120661763
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
120661763
NCBI-ProteinID:
XP_039796636
LinkDB
All DBs
Position
2N:63132883..63136333
Genome browser
AA seq
450 aa
AA seq
DB search
MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTSVGVAHDAFNTFFSETGSGK
HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT
SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGADDEGDEGEDY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagagagatcatcagcatccacatcggccaggccgggatccaggtcggcaacgcctgc
tgggagctctactgcctcgagcacggcatcgagcccgatggcaccatgcccagtgatacc
tcggttggcgttgcacatgatgccttcaacaccttcttcagcgagaccggttctggcaag
catgtgccgagggctatctttgtcgatcttgagcccactgtcatcgacgaggtgcgcact
ggctcgtaccgccagctcttccatccagagcagctcatctccgggaaggaggatgcggct
aacaactttgcccgtggccactacactgttgggaaggagattgtcgatctatgccttgac
cgtgttcgcaagctagcagacaattgcactgggctgcagggattcttggtcttcaatgct
gttggtggtggtactggttctggacttggttcactcctgttggagcgcctctcagttgat
tatggcaagaagtccaagctcgggttcaccatctatccttccccacaggtgtcaacagct
gttgtagagccatacaacagtgtcctctcgacccactccttgcttgagcacacagatgtt
gcagtcctcctggacaatgaggctatctatgacatatgccggaggtcccttgacattgaa
aggccaacctatactaacttgaacaggctgatctcacagatcatatcttcgcttaccacc
tccctgaggtttgatggcgctatcaacgtggatgttacagagttccagaccaaccttgtt
ccatacccacgtatccatttcatgctttcatcatatgcccccgttatctctgctgagaag
gcctaccatgagcagctctctgtgcctgaaatcaccaatgctgtctttgagccctcaagc
atgatggccaagtgtgacccaaggcatgggaagtacatggcttgctgcttgatgtaccgt
ggtgatgtagttccgaaggatgtcaatgctgcagttgcaaccatcaagaccaagcgaact
gtccagtttgtggactggtgccccactggtttcaagtgtggcatcaactaccagccaccc
actgttgtccctggaggcgacctggcaaaggtccagcgtgccgtgtgcatgatcagcaac
aacacagccgttgccgaggtgttctctcgcatcgaccacaagttcgacctgatgtacgcc
aagcgtgcgttcgtgcactggtacgttggtgagggtatggaggaaggcgagttctcggag
gcccgtgaggacttggctgcccttgagaaggactacgaggaggttggcgcagagggcgcg
gatgatgaaggcgacgagggagaagactattga
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