Panicum virgatum (switchgrass): 120661765
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Entry
120661765 CDS
T07260
Name
(RefSeq) importin-5-like
KO
K20222
importin-5
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120661765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120661765
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120661765
Pre-60S particles
120661765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_4
Importin_rep_6
HEAT
HEAT_2
TOR1L1_N
HEAT_EF3_N
Vac14_Fab1_bd
IFRD
RIX1
MMS19_C
INTS7_N
Arm
Adaptin_N
Cnd1
HEAT_Maestro
TPR_TNPO3_IPO13_3rd
Htt_N-HEAT_1
ARM_ARMC5
HEAT_GCN1
PPP2R1A-like_HEAT
Phasin_2
Motif
Other DBs
NCBI-GeneID:
120661765
NCBI-ProteinID:
XP_039796639
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All DBs
Position
2N:complement(63149476..63157608)
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AA seq
1126 aa
AA seq
DB search
MASAEDQAAAAALLGGDPAAFDALLSTLMSSSNADRSAAEAAFHRLRASHPEPLALRLAS
SLASPATPAELRAMAGVLLRKVLSPTPSSDASANNATPPPPLWPQLSPAGQSALKAHLLS
ALQSDPPKPIAKKVCDAVSELAALLLPENAWAELLPFLFRAASGPEAPNLQESALLIFAR
LADYIAESLLDHLMTIHNLLAAALAHPTSPDVRIAALGAAVNIVQCLPTNADRDKMQDLL
PAMMRALTDCLNSGQEASAQEALELLVELAGSEPRFLRRQIADVVGAMLQVAEASQLEDG
TRHLAVEFVITLAEARERAPGMMRRLPQFVGRLFAVLMQMLLDVEDDPSWHSAETEDEDA
GEGNNYGVAQECLDRLAIAIGGNAIVPIASELLPQYLSAPEWQKHHAALITLAQIAEGCA
KVMLKNLEQVVSMILNGFQHPHPRVRWAAINAIGQLSTDLGPDLQVHYHQKVLPALANAM
DDFQNPRVQAHAASAILNFSENCTPEILTPYLDGIVNKLLVLLQNGKQMVQEGALTALAS
VADSSQEHFKKYYDAVMPYLKAILMNATDKSNRMLRAKSMECISLVGMAVGKDKFRDDAR
QVMEVLMALQGTPMETDDPITSYMLQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPDV
TITSAESDDEIESDDDSIETITLGDKRIGIRTSVLEEKATACNMLCCYADELKEGFFPWI
DQVAPTLVPLLKFYFHEEVRRAAVAAMPELLRSAKLAVEKGQAQGRDESYVKQLSDYIIP
ALVEALHKEPETEMCSSMLDSLNECMQLSGRLLDETQVRAISDEIKNVIIASATRKRERT
ERTKAEDFDADEGELLKEENEQEEEVFDQVSECLGTLIKTFKASFLPFFDELSVYITPML
GKDKTPEERRIAICIFDDVAEQCRESALKYYDTYLPFLLEAANDENSDVRQAAVYGVGVC
AEFGGHVFRPLVGEALSKLNNVIRHPEARHPDNIMAYDNAVSALGKICQFHRDGIDATQV
VPAWLSCLPIKDDKIEAKVVHEQLCSMVERSDTEILGPQNQYLHKILSIFTEVLGNGTEL
ATDETKNKMVNIVRRFQQTLPPDFLASLFSNLQPQQQLLLQSILST
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgccgaggaccaggccgcggccgccgcgctgctggggggcgacccggcggcg
ttcgacgcgctgctgtcgaccctcatgtcgtcctccaacgccgaccgctccgccgccgag
gccgccttccaccgcctccgggcctcgcacccggagcccctcgcgctgcggctcgcctcc
tcgctcgcgtcgcccgccaccccagccgaactccgcgccatggcgggggtcctgctacgc
aaggtcctctccccgacaccgtcctccgacgcctccgccaacaacgccacgcccccgccg
ccgctctggccgcagctctcccccgccggccagtccgcgctcaaggcgcacctcctctcc
gcgctccagtccgaccccccgaagcccatcgcgaagaaggtctgcgacgccgtctccgag
ctcgccgccttgctgctgcccgagaacgcgtgggctgagctgctcccgttcctcttccgc
gcggcatcggggcccgaggcgcccaaccttcaggagtcggcgctgcttatcttcgcgagg
ctggcggattacatcgctgaatcgcttctcgaccatctgatgactatccacaacctgctc
gccgccgccctggcgcatcccacgtcccctgatgtgcgtattgcggccctgggtgccgca
gtcaacatcgtccagtgcctgcccaccaacgccgatcgggataagatgcaggatttgctc
ccggcaatgatgagggcgctcacggattgcctaaactctggccaggaggcctctgcgcag
gaggcgctggaactgcttgttgagctggctggttcggagccaaggttcctgcgacggcag
attgcagatgtggtaggggcaatgctacaagtcgctgaggcttcacagctggaggatggg
accaggcacttggctgttgagtttgtcattactcttgctgaggcaagggagcgtgcacct
ggaatgatgcggcgactcccacagtttgttggcaggctgtttgcagtgctgatgcagatg
ctgcttgatgtcgaggatgacccttcgtggcactctgctgaaactgaagatgaagatgca
ggtgaagggaacaactatggagtggcacaggagtgccttgaccgccttgccattgccatt
ggtggaaacgcaattgtgccaattgcatctgagctgcttccacagtacctgtctgctcct
gagtggcaaaagcatcatgctgcgctcataacacttgcacagattgcagaaggatgtgca
aaggttatgcttaaaaatttggaacaagttgtttcgatgatattgaatggattccaacat
cctcacccgcgtgtgagatgggctgcaatcaatgcgattggccagctctctacggatttg
gggccagacttgcaagttcattaccaccagaaggtgctgcctgcattggcgaatgctatg
gatgatttccagaacccacgagttcaggcacatgccgcatcggccatcctgaacttcagc
gagaactgtacgccagaaattttgacaccttacctggatggaattgttaacaaattactt
gttcttcttcagaatggcaagcaaatggtgcaagagggagcattgacagctctagcttca
gtagcggattcatcacaggagcactttaagaaatactatgatgctgtaatgccataccta
aaagctattttgatgaatgcaactgacaagtctaataggatgctccgggccaagtccatg
gagtgtattagtttggtaggaatggctgtgggtaaagacaagttcagagacgacgcaagg
caggttatggaagtacttatggctttgcaaggaactccaatggaaactgatgatccaatt
accagctacatgttgcaggcttgggccaggctatgcaaatgtcttggacaggatttcctt
ccttacatgagtgtggttatgccaccacttcttcagtctgctcagttgaagcccgatgtg
acaattacttcagctgaatcagatgacgaaatagaatcagatgatgatagcattgaaaca
atcactcttggagacaagaggataggaatcagaactagtgtgctggaagagaaagcaaca
gcttgcaacatgctgtgctgttatgctgatgagctcaaggagggtttcttcccatggatt
gatcaggttgccccaacattggtccctctgctgaagttttacttccatgaagaagtcaga
agagctgctgttgcggcaatgcctgaacttctgcgttcggccaaattggctgttgagaag
gggcaggctcaaggccgtgatgagtcttatgttaaacagttatctgactacataattcca
gctcttgttgaagcacttcacaaggagccagaaacagaaatgtgctcatccatgctggat
tcattaaatgagtgtatgcagctttctggtcgtttgcttgatgaaacccaagtacgagct
atttcggatgagattaaaaatgtcattatagctagcgcaaccaggaaaagggaacgtaca
gaaagaacaaaagcagaagattttgatgctgatgaaggagagctactcaaagaggagaat
gaacaagaggaggaagtatttgatcaggtcagcgagtgccttggaactttgattaagacc
ttcaaagcttctttcttgccattctttgatgagctttcagtgtacattacgccaatgttg
ggaaaagataaaacacctgaggagagaaggatagctatctgtatatttgatgatgttgcg
gagcaatgccgtgaatcagctttgaagtactatgatacataccttcctttccttttggag
gcagcaaacgatgagaattcagatgttcggcaggctgctgtctatggtgtgggtgtatgt
gctgagtttggtggtcatgttttccgccccctagttggagaggccctgtcaaaattgaac
aatgttatccgacatcctgaagcacgacatcccgacaatattatggcatatgacaatgct
gtttcggcacttggaaaaatatgtcaatttcatcgggatggtattgatgcaacccaggtt
gttccagcctggcttagttgcttgcctataaaagatgacaagattgaagctaaagttgta
catgagcaactttgctcaatggtggagaggtcggatacagaaattcttggccctcaaaat
caatatcttcataaaattctttcaatttttaccgaggttttgggcaatggaacagagctt
gctacagatgaaacaaagaacaagatggtcaatatcgtgaggcgattccagcagactcta
cctcccgattttctcgcatcattattttccaacttgcaaccgcagcaacagctcctccta
cagtccattctatcgacatag
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