Panicum virgatum (switchgrass): 120661775
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Entry
120661775 CDS
T07260
Name
(RefSeq) constitutive photomorphogenesis protein 10
KO
K20217
ubiquitin-conjugating enzyme E2 E [EC:
2.3.2.23
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120661775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120661775
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.23 E2 ubiquitin-conjugating enzyme
120661775
Ubiquitin system [BR:
pvir04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
120661775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UQ_con
UEV
DUF5855
RWD
Motif
Other DBs
NCBI-GeneID:
120661775
NCBI-ProteinID:
XP_039796653
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All DBs
Position
2N:63257123..63260144
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AA seq
189 aa
AA seq
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MSSSSSFPTSRFPFAAGAGPPGGGGFGGGGSSVRPWGSSGGTSVSSSGKRIQKELLDLNA
SDCSAGPKGDNLYHWLSTIIGPQGSPYEGGIFFLDIVFPPDYPFKPPMVTFKTRIYHCNV
DATGKVHLDILKDGWSPAFTISKVLLAIKDIISNPDPYTPLVMNISRQYLTDRTKHDEIA
AEWTMRFAR
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgtcctcgtccttccccacctcccgcttccccttcgccgccggcgccgggccc
cccggcggcggcggcttcggaggaggtggaagcagcgtgcggccgtgggggtcgagcggc
gggacgtcggtttcgtcttcggggaagcggatacagaaggagctgctggacctcaacgcc
tccgactgctccgccgggcccaagggcgacaacctctaccactggctgtccaccatcatc
gggccccaaggatcgccgtatgaaggagggatatttttccttgatatcgtgtttccccct
gattatcctttcaaacctcctatggtaacattcaaaacaaggatttaccactgcaatgtt
gatgccactggtaaagtgcatctggacattctgaaggatggctggagtccagctttcact
atttcaaaggtgttactggccatcaaagacatcatcagcaatccagatccatacaccccg
cttgtgatgaacatttcacgtcagtatctgactgacagaactaaacacgatgaaatagca
gctgagtggacaatgaggtttgcaagatag
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