Panicum virgatum (switchgrass): 120661800
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Entry
120661800 CDS
T07260
Name
(RefSeq) chitin-inducible gibberellin-responsive protein 2-like
KO
K27748
scarecrow-like transcription factor PAT
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120661800
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
GRAS
120661800
SSDB
Ortholog
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GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
120661800
NCBI-ProteinID:
XP_039796689
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All DBs
Position
2N:63597031..63600917
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AA seq
547 aa
AA seq
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MADTPTSHMVHPFGNVPRQTPKQFLYSGNAQHHCDPYQSASDTHVVPQHHYTMKSHSPDA
GSEEHETHKQYTLDSSAASGCSRHDSPSSQSIHTGSGSPLSHEDSHSGSTNGNGSPVSAS
CVTEDPTDLKQKLKDLEAVMLGTDSEIVDSLEISVANQLSLEPEKWVHMMSVPKGNLKEL
LIACARAVEHNNSFAIDLMIPELRKMVSVSGEPLERLGAYMVEGLVARLASSGNSIYKAL
KCKEPKSSDLLSYMHFLYEACPYFKFGYMSANGAIAEAVKGEDRIHIIDFQIAQGAQWIS
LLQALAARPGGPPFVRITGIDDSVSAYARGGGLELVGRRLSHIAGLYKVPFQFNAVAISG
SEVEEGHLGIIPGEAIAVNFTLELHHIPDETVSTANHRDRILRLVKGLSPKVLTLVEQES
NTNTAPFAQRFAETLDYYTAIFESIDLALPREDRERINMEQHCLAREIVNLVACEGEERV
ERHEVFGKWKARLMMAGFRPSPLSALVNATIKTLLQSYSPDYKLAERDGVLYLGWKNRPL
VVSSAWH
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgatactccaacttcccacatggtgcacccctttggcaatgtcccaaggcagact
ccgaagcaattcctgtattctggcaacgctcagcaccactgtgatccatatcagtcagct
tcggacacccatgttgtaccgcagcatcattacaccatgaagtctcattcaccggatgct
ggctctgaagagcatgagacccacaagcagtacacactggactcttctgcagcttctggt
tgctcgaggcatgattctccctccagtcagagtatccatactgggagtggcagccctcta
tctcatgaagatagccactccggctccaccaatggcaacggatcacctgtgagcgcttcc
tgcgtcactgaggaccctactgatctgaagcagaagctaaaggatcttgaggctgtgatg
cttgggacagactcagagatagtggatagccttgagatctctgttgcaaaccaactttcc
ttggaaccggagaagtgggtgcacatgatgagcgtgcccaaaggcaacttgaaggagctg
ctgattgcttgtgctagagcagtggaacataataacagtttcgcaattgatctgatgatt
ccagagctgaggaaaatggtctcagtgtctggtgagccacttgaaaggctgggggcctac
atggtggaaggtctggtggccaggctcgcctcctccggaaactcaatctacaaagctctg
aagtgcaaagagcccaagagttctgatctcctgtcctacatgcacttcctgtatgaggcc
tgcccctacttcaagtttggctacatgtcagcaaatggtgcaatcgcagaggctgtcaag
ggagaagacaggatccatatcattgatttccaaatcgcccaaggggcgcagtggatctct
ctccttcaggccctggcagccaggcctggtggaccaccattcgtgaggatcaccggcatt
gatgattcagtctcagcttacgcccgaggcggtggtctggagttggttggaaggagactt
tcacacattgctggcctctacaaggtgccctttcagttcaatgcagtcgctatctccggc
agtgaagtggaagagggacatctcggcatcattcccggcgaagccattgctgtcaacttc
accctggagctgcaccacatccccgacgagaccgtgagcacggcgaaccaccgggaccgg
atcctgaggctggtaaagggcctgtcgcccaaggtgctcacgctggtggagcaggagtcc
aacaccaacacggcccccttcgcacagcggttcgcggagacactggactactacacagcc
atcttcgagtccatcgacctggcgctgccgagggaggaccgggagcggatcaacatggag
cagcactgcctggcgagggagatcgtgaacctggtggcctgcgagggggaggagcgggtg
gagcggcatgaggtgttcggcaaatggaaggcgcggctgatgatggccgggttcaggccg
tccccactcagtgcgctggtgaatgccaccatcaagacgctgctgcagagctactcgcca
gactacaagctcgctgagagggacggcgtgctctacctcggctggaagaacaggcccctg
gtggtctcgtcggcatggcattaa
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