Panicum virgatum (switchgrass): 120661840
Help
Entry
120661840 CDS
T07260
Name
(RefSeq) probable LL-diaminopimelate aminotransferase, chloroplastic
KO
K10206
LL-diaminopimelate aminotransferase [EC:
2.6.1.83
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00300
Lysine biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01230
Biosynthesis of amino acids
Module
pvir_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
120661840
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120661840
Enzymes [BR:
pvir01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.83 LL-diaminopimelate aminotransferase
120661840
Amino acid related enzymes [BR:
pvir01007
]
Aminotransferase (transaminase)
Class I
120661840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Alliinase_C
Motif
Other DBs
NCBI-GeneID:
120661840
NCBI-ProteinID:
XP_039796757
LinkDB
All DBs
Position
2N:65569166..65573070
Genome browser
AA seq
469 aa
AA seq
DB search
MAAAPASSAAAMAAAPAIPASSSFISSSPCSLRVSKTSPRRPTGRVSHKISCVSRPPAVE
TSYKTSVPRNANMAKLQAGYLFPEIARRRAAHLLKYPDAKIISLGIGDTTEPIPDVITNA
MAERAHALSTIDGYSGYGAEQGEKKVRSAIAATDYADLGIEDSDIFVSDGAKCDISRLQV
LFGSNVTIAVQDPSYPAYVDSSVIMGQTGLYQQDVQKYGNIEYMRCNPENGFFPDLSTVA
RTDIIFFCSPNNPTGAAASRDQLTRLVKFAKDNGSIIVYDSAYAMYISDDSPKSIFEIPG
AREVAIETASFSKYAGFTGVRLGWTVVPKELLFSDGHPVAKDFNRIVCTCFNGASNIAQA
GGLACLSPEGLKAMHDVVGFYKENTEIIVDTFTSLGFNVYGAKNAPYVWVHFPGRNSWDV
FAEILEKANVVTTPGSGFGPGGEGFVRVSAFGHRDNIIEAARRLKQLYK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcccccgcctcttctgccgccgctatggccgcagcccccgcaatccccgcg
tcctcctccttcatctcgtcgtctccgtgctctctcagggtgtcgaagacaagcccccgg
cggcccacgggaagagtgtctcacaaaatcagctgcgtcagtaggccaccggccgtcgaa
acatcttacaagactagtgtcccgcgcaatgctaacatggccaagctccaagcaggatat
ttatttcctgagatcgccaggagaagagcagctcacttgctcaagtaccctgatgctaag
attataagcctggggataggtgacactacggaacccattccagatgtcataacaaatgcc
atggcagagagagcacatgccttatcaacaattgatggctacagtggttatggagctgag
caaggtgaaaagaaagtaaggtcagcaattgctgcgacagactatgcggaccttggtatt
gaagattcagacatatttgtctctgatggtgccaaatgtgacatttcccgcctacaggtc
ctttttggatctaatgtgacaattgcggtccaagacccatcatatcctgcatatgttgat
tcaagtgttatcatgggccaaactggcttatatcagcaagatgttcagaagtatgggaac
attgagtacatgagatgcaatcctgaaaatggatttttccctgatctgtcaactgtcgca
cgtacagatataattttcttttgctcaccgaacaaccccactggtgctgctgcctctcgg
gaccaactgacgagactagtcaaatttgctaaggataatgggtctatcattgtctatgat
tctgcctatgctatgtacatatcagatgacagcccaaagtccatctttgaaattcctgga
gcgagagaggttgctattgagacagcgtcattctcgaaatatgctgggttcactggagtc
cgtctaggttggactgttgtccccaaggaacttcttttctcagatgggcatccagtcgct
aaagatttcaaccgcatagtgtgtacttgcttcaatggcgcatcaaacattgctcaagct
ggtggcttagcttgcctctctccagagggtctgaaggctatgcatgatgttgttggcttc
tacaaggagaatactgaaataattgtcgacacatttacgtcgcttggattcaacgtgtat
ggtgccaagaacgctccttatgtgtgggtgcacttccctggtcgcaattcatgggatgtg
tttgctgagatccttgagaaggcgaacgttgtcactacccctggcagtggatttggaccc
ggcggtgaaggcttcgtgagggtcagcgcattcggccacagagataacatcattgaagca
gctaggagactaaaacagctgtacaagtga
DBGET
integrated database retrieval system
