KEGG   Panicum virgatum (switchgrass): 120661887
Entry
120661887         CDS       T07260                                 
Name
(RefSeq) lysine-specific demethylase JMJ703-like
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pvir01009]
    120661887
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pvir03036]
    120661887
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     120661887
Protein phosphatases and associated proteins [BR:pvir01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120661887
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120661887
SSDB
Motif
Pfam: JmjC JmjN zf-C5HC2 KDM5_C-hel
Other DBs
NCBI-GeneID: 120661887
NCBI-ProteinID: XP_039796815
LinkDB
Position
2N:65978883..65987440
AA seq 993 aa
MGTECIMATVNEDPELSFPPGFGPFVGLALQGTQTNVKPGGTHSSSVQVAQSIEKDVKVL
EPNSAHCRSGTPASTSGSHSCRKSLRNKPPIDYSLYDLTSDEESEIESPEKGVRSVRRRQ
QLPKGVLRGCAECADCQKVVAKWNPSGARRPVLEEAPVYYPSEEEFKDTLKYIESIRPTA
EQYGICRIVPPPSWKPPCLLKEKNKWECSKFSTRVQKVDKLQNRKSSKKSRGGGKMKKRR
KVSEPKDICNINYNQTGMHQSPERFGFEPGPEFTLQTFKKYADDFSDQYFNKDACGDSPP
SVEDIEGEYWRIVESPTEEIEVIYGADLETGTFGSGFPKFSPEVKSDGEHKYAESGWNLN
NLPRLQGSVLSFEGGDISGVLIPWVYVGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGV
PGKDAMNLEVAMKKHLPDLFEEQPDLLHNLVTQFSPSLLKSEGVPVYRCVQHEGEFVLTF
PRAYHAGFNCGFNCAEAVNVAPIDWLPIGQDAVELYREQARKITISHDKLLLGAANEAIR
AQWDILFLKRNTADNLRWKSMCGPDSTICKSLKARIEMELTQRKDICSPSQCRKIDAEYD
SADRECAFCYCDLHLSACGCPCSPEKYTCLIHAMQLCSCDWSKRLFLFRYDVNELNILAN
ALGGKLSAIHRWGVSHLGLSLNSCVKREKEQDLKTLRRATDGPRRSYMSHASTVSLSPSL
VCNEQKSCGNKMLNSACSEMNTAVPFAEQLKLGNVSPQKEPCLKNDLACTLNTGASQLQY
NGGPGGDKNSAASLSVPAGQSSSSNVRTRSFSTSGEYNKNAYGSLPLDHRSNMKPSSESS
INSHRLMTSNTNASLCYSYNDKIHITPETNALVTTEKDGNQIRAASSQHFERTVSRAQTV
SQEASASVFASKPPPGPSLVKNTYGGFSSSSAHLGRPNFCNQQTNDGRLQRKSESLSGLE
AREHSPLFVQPALGNGSQQKGPRIANVVYRFKG
NT seq 2982 nt   +upstreamnt  +downstreamnt
atgggaacagagtgcattatggccacagtgaatgaggatccggaactctcatttccacct
ggatttggaccttttgttggccttgcattgcagggtacccaaaccaatgtcaaaccaggt
ggtactcattctagttcagtgcaagtagcacagagcatcgagaaagatgtcaaagttttg
gaacccaattcagcgcattgtaggagtggcacacctgccagtacttctgggagccatagt
tgcaggaaatcacttcgtaacaagcctccaatagactatagcctttatgaccttacctca
gatgaagaatctgaaattgaatcgccagaaaagggagtaagatcagtgagacgtaggcaa
caattaccaaaaggagtccttcgaggctgtgcagaatgtgctgattgtcaaaaggttgtt
gcaaagtggaatccatctggtgcacgcaggcctgttcttgaggaggctcctgtttactat
ccatctgaggaggaattcaaggacaccttaaaatacattgagagtatacgacctacggca
gaacaatatggaatttgtcgcattgttccaccaccttcatggaagcctccatgtcttctt
aaagagaagaacaaatgggaatgctcaaaattttctactcgagtacagaaggttgacaag
ctccaaaaccgtaaatcatccaagaagagcagaggaggtgggaagatgaagaagcggaga
aaggtttcagagccgaaagatatttgtaacattaattacaatcaaactgggatgcatcaa
agcccagagaggtttggatttgaaccaggaccagagtttacactacaaacatttaagaag
tatgcggatgacttcagtgatcagtattttaacaaagatgcatgtggggactcgccacca
tcagtggaagatattgaaggcgagtattggcgcatagttgaaagtcccactgaagagata
gaggtaatatatggcgccgatttggagactggaacttttggtagtggttttccaaagttt
tctcctgaagtaaaatctgatggtgagcataagtatgcagaatctggctggaatctaaac
aatttgcctagactacaaggttcagttctatcgtttgagggtggtgacatctctggtgtt
ttgatcccttgggtatatgttggcatgtgcttttcatcattctgctggcatgttgaagac
catcatttgtactctctgaactacatgcattggggtgctccaaagatgtggtacggagtt
ccaggaaaggatgccatgaatttggaggtagcgatgaagaaacatctacctgacttgttt
gaggagcagcctgatttgcttcacaatctggttactcaattttctccatcattgcttaaa
tctgaaggagtaccggtttaccgatgtgttcagcatgagggagagtttgtcctgacattc
ccacgagcataccatgctggtttcaattgtggtttcaattgtgcggaagctgttaatgtg
gcaccgatagattggttaccaattgggcaggatgctgttgagctttatcgtgaacaggcc
cggaaaataactatttcacatgataagctgttacttggggctgcaaacgaagcaataaga
gctcagtgggacattcttttcctcaagagaaatactgctgataacttgaggtggaaaagc
atgtgtggacctgacagcaccatatgcaagtcacttaaggcaagaatcgagatggagttg
acccaaagaaaggatatatgctctccatctcaatgtagaaaaatagatgctgaatatgat
tctgcagatagggagtgtgcattttgctactgtgatctgcatctttctgcctgtggttgt
ccatgttctccagagaaatatacttgccttatacatgcgatgcagctttgctcatgtgac
tggagtaaaagacttttcctattccgttatgatgtcaatgaactaaacatcttagctaat
gctttgggtgggaagttaagtgccattcacaggtggggtgtctctcatcttggattaagt
ttgaactcatgtgttaaacgagaaaaagagcaagatctgaagactcttcggagagcaact
gatggccccagaaggtcgtacatgtcacatgcatcaacagtatcattgtcaccttcactg
gtttgcaatgaacagaaaagctgtggaaataagatgctgaactcagcttgttcggaaatg
aacactgctgttccttttgcagagcaactaaagttgggaaatgtttcaccacaaaaggag
ccatgcctgaagaatgatttagcatgtacactaaatactggtgccagccaattgcagtat
aatggagggcctggaggcgacaaaaactcagcagcaagtttgtcagttcctgctggtcaa
tcatcttcttccaatgttaggacaaggtcctttagcacttctggtgaatacaataaaaat
gcatatggctctctaccacttgatcatagaagcaacatgaagcctagctcggaaagctca
atcaattcccataggttaatgacatctaacactaatgcatctctgtgttactcttacaat
gataaaatacacataacaccagagactaatgccttggtgacgacagagaaagatggtaat
cagattcgtgctgcatcaagtcagcactttgagaggactgtttcaagagcacaaactgtc
tctcaggaagcatcagctagtgtctttgcttcaaagccacctccaggcccttcacttgtg
aaaaatacatatggaggttttagttcaagcagtgcccatcttggtcgtccaaatttttgt
aatcagcaaacaaatgatgggcgccttcaaagaaaatctgaatctttatctggtctggaa
gctcgggagcattcacctttatttgtgcaacctgctttgggaaatggaagtcaacagaag
ggtcctcgcatagccaatgttgtgtatcgattcaagggctaa

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