Panicum virgatum (switchgrass): 120661916
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Entry
120661916 CDS
T07260
Name
(RefSeq) malate dehydrogenase, chloroplastic-like
KO
K00026
malate dehydrogenase [EC:
1.1.1.37
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00020
Citrate cycle (TCA cycle)
pvir00270
Cysteine and methionine metabolism
pvir00620
Pyruvate metabolism
pvir00630
Glyoxylate and dicarboxylate metabolism
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
Module
pvir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pvir_M00012
Glyoxylate cycle
pvir_M00168
CAM (Crassulacean acid metabolism), dark
pvir_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
120661916
00620 Pyruvate metabolism
120661916
00630 Glyoxylate and dicarboxylate metabolism
120661916
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120661916
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
120661916
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
120661916
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Motif
Pfam:
Ldh_1_N
Ldh_1_C
3Beta_HSD
Semialdhyde_dh
Motif
Other DBs
NCBI-GeneID:
120661916
NCBI-ProteinID:
XP_039796861
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Position
2N:complement(66416307..66418634)
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AA seq
391 aa
AA seq
DB search
MAAAATATLSLASVPCRKHQLRRGASAFNAQQFSASSSHWQQHSATLRWGVPRPRAAKRV
IVAQAGAGSYKVAILGAAGGVGEPLSLLIKMSPLVSALHLYDIATVNGVTADLSHCNTPV
EVAGFTGKEELAGSLAGADVVVITAGVPRKPGMTLDDLFSTNAGIVKELVEAVADHAPGA
LIHIITNPVNSTVPIAAEVLKWKGAYDPRKLFGVTTLGVVRANAFVAATKGLPLADVDVP
VVGGHAGTTIVPLLSKARPKAAFTDEEVEELTARVQNAGTEVVEAKAGAGSATLSMAYAA
ARFLEASLRGLDGDADVYECAYVQSQVVPELPFFASRVKLGREGVEEVVGSELRGLSEYE
ARALEALKPQLKASIDKGIALVQQQQEAALN
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctgcaaccgcaaccctatccttggcgtcagttccttgcagaaagcatcag
ctccggcgtggagccagtgccttcaatgcgcaacaattcagtgcttccagctcccactgg
cagcagcactctgccactctgaggtggggagtgccaagaccacgcgccgcgaagcgtgtc
atcgtcgcccaggccggcgccggcagctacaaggtggccatccttggcgcggcgggtggg
gtcggggagccgctctcgctcctgatcaagatgtccccgctcgtctcggcgctgcacctc
tacgacatcgccaccgtcaacggtgtcaccgccgatctcagccactgcaacacgccggtg
gaggtcgccggcttcaccgggaaagaagagctcgccggcagcctggccggcgcggacgtg
gtggtcatcaccgccggcgtgccccggaagcccggcatgacgctggacgacctgttcagc
accaacgccggcatcgtgaaggagctcgtggaggcggtggcggaccacgcgccgggcgcg
ctgatccacatcatcaccaacccggtgaactccacggtcccgatcgccgcggaggtcctc
aagtggaagggcgcgtacgacccgcggaagctgttcggcgtcacgaccctgggcgtggtc
cgcgccaacgcgttcgtcgcggcgacgaagggcctcccgctggccgacgtcgacgtgccg
gtcgtgggcggccacgcggggaccaccatcgtgccgctgctgtccaaggcgcggcccaag
gcggcgttcacggacgaggaggtcgaggagctcacggccagggtccagaacgccggcacc
gaggtggtggaggccaaggccggcgccgggtccgcgacgctgtcgatggcgtacgccgcg
gcgcggttcctggaggcgtcgctgcgggggctcgacggcgacgccgacgtgtacgagtgc
gcatacgtgcagtcccaggtcgtgccggagctcccgttcttcgcgtccagggtgaagctc
gggagagaaggggtcgaggaggtggtgggatcggagctcagggggctctcggagtacgag
gcgcgcgcgctggaggccctcaagccgcagctcaaggccagcatcgacaagggcatcgcg
ctcgtgcagcagcagcaggaggcggcgttgaactga
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