Panicum virgatum (switchgrass): 120661965
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Entry
120661965 CDS
T07260
Name
(RefSeq) novel plant SNARE 12-like
KO
K08494
novel plant SNARE
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120661965
Membrane trafficking [BR:
pvir04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
120661965
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
Occludin_ELL
MCPsignal
Hydro_N_hd
VBS_C3G9
Spike_torovirin
Tox-PLDMTX
RPW8
CAP_N
Motif
Other DBs
NCBI-GeneID:
120661965
NCBI-ProteinID:
XP_039796934
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All DBs
Position
2N:66838418..66845290
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AA seq
349 aa
AA seq
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MRVGSQLGPGPAHHPTARTKPTPLPVPGSVLPPDANRRPPPECRADRRLTSPTRPRGGAA
RRRCSSALGVGPPPPPPEAERGAMASDVPMSPELEQVDGQIQDIFRALQNGFQKMDKIKD
SNRQSKQLEDLTGKMRECKRLIKEFDRIHKDEEKKNPPDVNKQLNDKKQFMIKELNSYVT
LRKTYQSSLGNKRIELFDTGNDQVAEDTPAQMASEMSNQELISAGRKQMDQTDQAIERSK
MVVAQTVEVGAQTAASLAQQTEQMKRIGNELDSVHFSLKKASQMVKEIGRQVATDKCIMA
FLFLIVCGVIAIIVVKIVNPHNKSIRDIPGLAPPAMNRKLLSIDPFGGL
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcggatcacagctgggcccgggcccagctcaccacccaacggctcgcaccaaa
cccacccccctcccagtcccaggctccgtcctacctcccgacgccaaccgccgccctcca
ccggaatgccgggctgaccgacggctgacgagcccgaccagaccacgaggaggcgccgca
cgccgccgctgctcttctgctctgggggttggaccccccccccccccccccgaggcggag
cgcggagccatggcgagcgacgtgcccatgagccccgagctcgagcaggtggacggccag
atccaggacatcttccgcgccctccaaaatgggttccagaagatggataagatcaaggac
tccaacaggcagtccaagcagctggaagatctcacgggcaagatgagggagtgcaagcgc
ttaatcaaggaatttgatcgcatacacaaagatgaggagaaaaagaacccacctgatgtc
aacaagcagctaaatgacaagaagcagttcatgatcaaagagttgaattcctatgtcacc
ttgaggaaaacgtaccaaagtagccttggtaataagaggattgagttattcgatactggt
aacgatcaagtggctgaggacacaccagctcaaatggcatcagaaatgtcaaatcaagag
ctcattagcgctggaaggaaacaaatggaccaaactgaccaagctattgagcgttcaaaa
atggttgtagcacaaactgttgaagttggagctcagactgctgcaagtctggcacagcaa
acagaacaaatgaagagaatcggcaatgagcttgactctgttcacttctccctgaagaaa
gctagtcaaatggtgaaagagattggtcgccaggttgcaactgacaagtgcattatggcg
ttcttgtttctgattgtttgtggtgttattgcaataattgttgttaagattgtcaacccg
cacaacaagagcatcagagacatcccggggctggcacctcctgctatgaacaggaagctg
ctctccatcgaccctttcggaggactctga
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