Panicum virgatum (switchgrass): 120662008
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Entry
120662008 CDS
T07260
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00510
N-Glycan biosynthesis
pvir00513
Various types of N-glycan biosynthesis
pvir01100
Metabolic pathways
pvir04141
Protein processing in endoplasmic reticulum
Module
pvir_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
120662008
00513 Various types of N-glycan biosynthesis
120662008
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120662008
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Motif
Pfam:
Ribophorin_I
Motif
Other DBs
NCBI-GeneID:
120662008
NCBI-ProteinID:
XP_039796990
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Position
2N:67331039..67335276
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AA seq
475 aa
AA seq
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MPPPLQTLTTSTLFLLVLLTASAVSCSSLPPEDGIRVVSAEKRIDLTSPIVKVYLTLKVE
NAPAASDASQVLLAFTPTEAQHLAIVKATRAEGKRKKKTYVPLSVEASDLASTALNGARL
YSILLGAPLKPGETTTLEVLYVLTHTLEPFPAEISQSESELVYFRDSAVLLSPYHVLEQV
TYIKTPSNRIEFFTRVDPTSRAGTELKYGTYKNQVPNSYLPILVHYENNHPFAVVEELVR
KVQISHWGNVQITEHYKLRHGGARHKGVFSRLEYQSRPSISGASSFKNLLARLPPRVHSV
YYRDEIGNISTSHLRTDSLKSELEIEPRYPLFGGWHCTFTIGYGLPLQDFLFESDDGRRY
INLTFGCPLLDTVVDDLTIKVVLPEGSKNPQPVVPFVTEKHLETSYSYLDVVGRTTVVLK
KKNVVGEHNVPFQVYYEFNPIFMLAEPLMLVSAALLFFVACIAYLHMDLSIGKSS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgcccctccaaactctaaccacttccaccctctttctcctcgtcctgctcacc
gcttccgccgtttcctgttcttccttgccgccggaggacggcatccgggttgtctctgcc
gagaaaaggatcgacctcaccagtcccattgtcaaagtctatctaacattgaaggtcgag
aatgctccagctgcctctgatgcctcccaagttcttctcgccttcacacccacagaggct
caacatcttgctattgtcaaggccacaagagcagaggggaagcgcaagaagaagacatat
gtgcccctctcggttgaagcctctgatctcgcctccactgccctgaatggtgctcgcctc
tactctattctgctgggcgctcctctgaaacctggcgagacaaccactcttgaagtgtta
tacgtgctgacacacactttagagccctttcctgctgagattagccagtcagagtccgag
ctggtttacttccgtgacagtgcggtgcttctctcgccttaccatgttctggagcaggtt
acttacatcaaaacaccaagcaataggattgagttcttcacaagggtcgatccaaccagt
cgtgctggtactgaattgaaatatggcacatataaaaaccaggtgccaaactcatatttg
ccaatccttgtgcactatgagaataaccatccttttgctgttgttgaggagctcgtacgc
aaggtgcagatttctcattggggaaatgtccaaatcactgagcattataaactaaggcac
ggtggggctcggcacaaaggagtcttttcaaggcttgagtatcagtctaggccatctatc
agtggagcgtcgtcattcaagaatcttcttgcaaggctgcctcctcgggttcattcagtt
tattatcgtgatgagattggtaacatctccacatcccatctgcgcaccgattcactcaag
tcggaactagaaattgagcccagatatccattatttggtggctggcactgcacgttcacc
attggctatggtctaccattgcaagattttctctttgagtcagatgatggccggcgttac
atcaaccttacttttggttgccctctattggataccgtggttgatgatcttacaattaaa
gttgtgcttcctgaaggatcaaaaaatccacagcctgtagttccttttgtaacagagaaa
catcttgagactagttattcataccttgatgttgttggaaggacgacggtggtactaaaa
aagaaaaatgttgtaggcgagcacaacgttcctttccaggtgtactatgaattcaatccg
atcttcatgctggcggaaccattgatgctagtatctgcagcgttgctgttctttgtcgcc
tgcattgcttatcttcacatggatctttccatcggaaaatcatcatag
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