Panicum virgatum (switchgrass): 120662080
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Entry
120662080 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120662080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120662080
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120662080
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
120662080
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GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-Di19
FAIM1
Motif
Other DBs
NCBI-GeneID:
120662080
NCBI-ProteinID:
XP_039797102
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Position
2N:67991286..67996160
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AA seq
337 aa
AA seq
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MSTMLKLTCLQNCQSWMSTFSTVTAKDDSVPVGVPMASVTYIDDSHAEVIDPPKNEEMLD
VTELVGEHIQHSPKPNVTSYGNVRELLECPVCLSAMYPPIHQCSNGHTLCSGCKPRVHNR
CPTCRHELGNIRCLALEKVAASLELPCKYQNFGCLGIYPYYCKLKHESQCQYRPYTCPYA
GSECTVAGDIPYLVNHLKDDHKVDMHNGSTFNHRYVKSNPHEVENATWMLTVFSCFGQYF
CLHFEAFQLGMAPVYIAFLRFMGDDAEAKNYSYSLEVGGSGRKMTWQGVPRSIRDSHRKV
RDSYDGLIIQRSMALFFSGGDRKELKLRVTGRIWKEQ
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtccactatgctaaagctgacttgtcttcagaactgccaaagctggatgtccactttc
agtaccgtcactgcaaaagatgattctgtacctgtaggcgtccccatggcatcagttact
tatattgatgatagccatgctgaggttattgatcctccaaagaatgaggagatgttggat
gtcactgagctcgttggtgaacatatccagcattcaccgaaaccaaatgtgacaagttat
ggtaatgtgcgtgagctactggaatgccctgtgtgtttgagtgccatgtatcctccaatt
catcagtgctccaacggacatactctgtgttctggatgcaagccaagggttcataatcgc
tgcccaacatgcaggcatgaactgggtaacataagatgtcttgctctggagaaggtagct
gcatcgctagagcttccatgcaagtaccagaacttcggttgcttgggcatatacccttat
tattgcaagctgaaacatgaatcacaatgccaatacagaccctatacttgtccgtatgct
ggatctgaatgcacagttgctggtgacattccatatctagtaaatcacttgaaagatgac
cataaggttgacatgcacaatggaagcactttcaatcatcgttatgtcaaatcaaatcct
catgaagttgagaatgccacctggatgctcacggttttcagctgctttggccagtatttc
tgtctgcatttcgaggcattccagctgggcatggcacctgtctacattgccttcctccgc
ttcatgggcgacgatgctgaagctaagaattacagctacagcctggaggttggaggcagt
ggtcgtaagatgacatggcaaggcgtccctcgaagcatcagagacagccacaggaaggtc
cgggacagctatgacgggctcatcatccagcggagcatggcccttttcttctctggtggt
gacaggaaggagctgaagctgcgggtcactgggaggatctggaaggagcaatga
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