Panicum virgatum (switchgrass): 120662103
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Entry
120662103 CDS
T07260
Name
(RefSeq) 4-alpha-glucanotransferase DPE2-like
KO
K00705
4-alpha-glucanotransferase [EC:
2.4.1.25
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120662103
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.25 4-alpha-glucanotransferase
120662103
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_77
CBM_20
Motif
Other DBs
NCBI-GeneID:
120662103
NCBI-ProteinID:
XP_039797132
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Position
2N:68237731..68245304
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AA seq
950 aa
AA seq
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MASSGPTSGKKSLNTVTLLFKLPYYTQWGQSLLITGSEPALGSWNVKQGLSLSPVHQDNE
LIWCGKVSVAAAFTCEYKYYVVDDNKNVLRWEAGENRKLVLPSGVQEGDIIEIRDWWQDA
SEALFLRSAFKNVVFNATEGVKKESQSASLNKSLDPEDIVVQFVISCPRLESGSTVVVTG
SNPQLGRWQAQDGLKLTYVGDSLWKAICVLRKSEFPVKYKYCQISQAGNSSLELGPNREV
DIDLSSPKQSRYVVLSDGALRDEPWRGAGVAVPVFSIRSDEDLGVGEFLDLKLLVDWAVN
SGFHLVQLLPINDTSVNGMWWDSYPYSSLSVFALHPLYLRVQALSDAIPADVKEEIQQAK
KQLDKKDVDYEATLSSKLSIARKIFNLEKDKVLNSSSFKQFLSENEEWLKPYAAFCFLRD
FFETSDHSQWGRFSQFSKEKLEKLISEGTLHHDVIHFHYYVQYHLYMQLSDAAAYARKKK
VILKGDLPIGVDRNSVDTWVYPTLFRMNTATGAPPDYFDKNGQNWGFPTYNWEEMSKDNY
GWWRARLTQMAKYFTAYRIDHILGFFRIWELPDHAATGLLGKFRPSIPLSQEEFLSEGLW
DFNRMSRPYIRQEILEEKFGSFWTVIAANFLNEYQKQCYEFKEDCNTEKKIIAKIKTSPE
KSLWLEKEDSIRRGLFDLLQNVVLIRDPEDPTKFYPRFNLEDTSSFRDLDEHSKNVLRRL
YYDYYFARQENLWRQNALKTLPVLLNSSDMLACGEDLGLIPACVHPVMQELGLIGLRIQR
MPSEPNTEFGIPSQYSYMTVCAPSCHDCSTLRAWWEEDEGRRSRFYKTVVGSDEEPPSRC
TPEVVHFIVQQHFDAPSMWAIFPLQDLLALKDKYTSRPAPEETINDPTNPRHYWRFRVHV
TLESLLDDKDIQATIKGLVTSSGRSFPGKKVEGADESGEKLSKVQLNGKA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctcggggccaacgtctgggaagaaatctctaaatacagtgactttgcttttc
aaattaccatattacacacaatgggggcagagccttctgatcaccggctcggaaccggca
ctgggttcgtggaatgtcaagcaaggactgtctctgagtccagttcatcaggataatgag
ctaatctggtgtggaaaagtgtctgttgctgctgccttcacctgtgagtacaaatactat
gtagtggatgacaacaagaacgttttgagatgggaggctggggagaataggaaactagtc
ctgccaagtggcgttcaagaaggagacataattgaaatccgtgactggtggcaggatgct
tctgaagcccttttccttagaagcgcattcaagaatgttgttttcaatgctacagaaggt
gttaaaaaggaatcccagtcggcatccctcaataaaagtttggatcctgaagatatcgtt
gtccagttcgtaattagctgtcctcgactcgaatctggctctactgttgtcgtcactgga
agtaatcctcagttaggaagatggcaagctcaagatggtctcaagctgacctatgttgga
gattccttgtggaaagcaatctgtgttttgcggaagtctgagttccctgtaaaatacaaa
tactgtcaaatcagtcaagcaggaaactcttcattggagctaggtccaaacagagaggtt
gatatcgatttatcatcaccaaagcaatccagatatgtcgtgttatctgatggtgccctc
cgggatgaaccatggaggggtgcaggtgttgctgtacctgtgttttcaataagatcagat
gaggaccttggtgttggagaatttctagatcttaaacttcttgttgactgggcagtcaat
tcaggtttccatcttgttcagctccttccaatcaacgatacttcagttaacgggatgtgg
tgggattcttatccatacagctcactctctgtatttgcgttgcaccccttgtacctgaga
gtacaagcactttcagatgcgattccagcagatgtcaaggaagagattcagcaggcaaag
aagcaattggataaaaaggatgttgactatgaggcaacattgtcctcaaaattatcgatt
gctaggaaaatattcaatttagaaaaggacaaagtgctaaactccagttctttcaagcag
tttttatctgaaaatgaggaatggttgaaaccatatgcggcattttgctttttgcgggac
tttttcgagacatctgatcacagccaatggggtcggttttctcagttttccaaggaaaag
cttgagaagcttatttctgaaggtactttgcaccatgacgttatccattttcattactat
gttcagtaccatctatatatgcaattatctgatgcagctgcatatgcaagaaagaaaaag
gttatcctgaaaggtgatttacctattggcgttgacaggaatagtgtggatacttgggta
tacccaactttatttcgcatgaatactgctaccggagcacctcctgattattttgacaag
aatggtcaaaattggggttttccaacatataactgggaggagatgtcaaaggataattat
gggtggtggcgagctcgtctgacacagatggcaaagtacttcacagcataccggatagac
cacattttgggtttctttagaatatgggagcttccagatcatgctgcaacaggtttatta
gggaaatttagaccttcaattcctcttagtcaggaggagtttctaagtgaaggactatgg
gatttcaatagaatgagtcggccatacattcgtcaagaaattctggaggagaagtttgga
tccttttggacagtcattgcggccaactttctaaatgagtatcagaaacagtgttatgag
tttaaagaagattgcaacacagagaaaaagattattgcaaagattaaaacaagtcctgaa
aaatcactgtggctagagaaagaagacagtatccgccgtggtctttttgatttattacag
aatgttgttcttatcagggatccagaggaccccacaaaattttatccccgtttcaacctg
gaagatacttcaagttttagggaccttgatgaacacagcaaaaatgttctcagaagattg
tattatgactattattttgctcgccaagaaaatctctggcgtcaaaatgcactgaagact
ctgcctgtcctgttgaactcgtcagatatgttggcatgtggagaagaccttggtcttatc
cctgcttgtgttcaccctgttatgcaagaacttgggttgattggactgcgtatccaaaga
atgcctagtgaaccaaacacggaattcggtattccttctcaatacagctatatgacggtt
tgtgctccctcatgtcatgattgctctacattacgtgcttggtgggaagaagacgaagga
agaagaagtcgtttctacaagactgtagttggcagtgatgaagagcccccatctcgctgc
accccagaagtagttcacttcattgttcagcagcattttgatgctccatcaatgtgggca
atctttccacttcaggaccttctcgcactgaaagacaagtacacctcaagaccagcacca
gaggaaacaatcaatgaccccactaacccaaggcactattggagattccgtgtccatgtg
acgttggagtccctgctggatgacaaggacatccaggcaaccatcaagggccttgtcaca
agtagcgggagatccttccctggaaagaaggtggaaggtgccgacgaaagcggagagaag
ctatctaaggtgcagttgaatggtaaagcttag
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