Panicum virgatum (switchgrass): 120662112
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Entry
120662112 CDS
T07260
Name
(RefSeq) tubby-like F-box protein 6 isoform X1
KO
K19600
tubby and related proteins
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pvir03037
]
120662112
04990 Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
120662112
Cilium and associated proteins [BR:
pvir03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120662112
Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
Other domain-containing proteins
Tubby family proteins
120662112
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tub
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
120662112
NCBI-ProteinID:
XP_039797146
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Position
2N:68330834..68334431
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AA seq
405 aa
AA seq
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MPFSSMIQEMKGEIGAISRRGLMRSRSRPHSTGRVQRVEPDEAAMRESSWAHVPPELLRV
VLAKVEAVEARWPGRGAVVACAGVCRGWRGAVKEIVRAPEACGRLTLPISLKQPGPRDGP
LKCFIRRNRATQSYFLCIGVTDGLADDGKFLLSARKYRRPSCTEYLISLDARDTSKGNGT
YIGKLRSNFLGTKFTVYDAHPPCAGAAVSKGSSAHMIGSAQVSPMKPLPAGNYPVSHISY
EVNVLGSRGPRKMNCVMDSIPVSAIKEGGIAPTQTEFPSSSSNSSSLASVPFFGSKSGRL
DAQLTTQNECKVALKNKSPRWHEQLQCWCLNFHGRVTVASVKNFQLVASDERAPTPSNQE
EEDDVILQFGKIGKDLFTMDYRYPISAFQAFAICLSSFDTKIGCE
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcagcagcatgatccaggagatgaagggcgagatcggcgcaatctcgcggcgc
ggcctgatgcggtcgcggtcgcggccgcacagcacgggccgcgtccagcgagtggagccg
gacgaggcggcgatgcgggagagctcctgggcgcacgtccccccggagctcctgcgggtg
gtgctggcgaaggtcgaggcggtggaggcgcggtggccgggacgcggggccgtcgtggcg
tgcgccggcgtctgccggggctggaggggcgccgtgaaggagatcgtgcgcgcgccggag
gcgtgtgggaggcttaccttacccatctctctcaagcagcctggcccaagggatggccct
cttaaatgtttcattaggaggaaccgggctactcagtcatattttctgtgcattggagtc
actgacggattagctgatgatgggaaattcctactttctgcccgcaaataccgaaggcca
tcatgcactgaatacctgatttcacttgatgcgcgtgatacgtcaaaggggaatggtact
tatattggcaagttaagatcaaacttcttaggcacaaaatttactgtctatgatgcccat
ccaccttgtgccggagctgcggtttcgaagggttcatctgcgcacatgatcggttcagcc
caagtttctcccatgaagcctctgcctgctgggaattatccagtttcgcacatttcttac
gaagtgaatgtcttgggttctagggggccaagaaagatgaactgtgttatggattctatc
cctgtatcagcgattaaagaaggagggattgctcccacacagactgaatttccatctagt
tctagtaactccagctcgctcgcatcagttccattctttggatcgaaatcaggccgactg
gatgctcaattaaccactcagaatgaatgtaaggtggctctgaagaacaagtccccgagg
tggcatgaacagctccagtgctggtgcctcaatttccatggacgggtaacggttgcgtcc
gtaaagaacttccagctggtggcttcagatgagcgtgctccaactccaagtaaccaggag
gaggaggatgacgttatactccagtttggcaagatagggaaggacctattcaccatggac
taccgctatcccatatctgcatttcaggcatttgccatctgcctaagcagctttgacacc
aaaattggttgtgaatga
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