Panicum virgatum (switchgrass): 120662128
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Entry
120662128 CDS
T07260
Name
(RefSeq) RNA-directed DNA methylation 4-like
KO
K28237
RNA polymerase II nuclear localization protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120662128
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120662128
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Gene cluster
GFIT
Motif
Pfam:
DUF1499
Motif
Other DBs
NCBI-GeneID:
120662128
NCBI-ProteinID:
XP_039797175
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Position
2K:4573874..4578337
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AA seq
329 aa
AA seq
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MASAAAAAGEASTSEPAPKEKPIVVRVKRKPSQTRPDAFWLEINERPAKKAMLDFSSLSI
SGPPSSSSAATEEPRVKKLLVQHIETVHHSEAVENVLHSLLLADSNSKEIKSKTKEWNDR
IKQDKKTDQLRSAARQRHEDLGRNARFAQIWKSRKGEKNEADESLREICHLYDAVQVDPD
EERHPAEPRITSFEEGAVLCNFLPLIREYLPSVAEEIESDIISLAQSEDSEVYDIYTVKE
VDDTNMEDTSASSYPRLQVDDGEDECYDDDYPYDTDDSNAEDNPLFDYPEELSEDEDDGS
NDEDPFGDREGSGSEYEKEEVEVDADEQW
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgcggcggcggccgccggcgaagcctccacctcggagcccgcgcccaaggag
aagcccatcgtcgtccgggtcaagcgcaagccatcgcagacccgcccggacgcattctgg
ctagagattaatgagaggccagcgaagaaagcgatgctcgatttctccagcctctccatc
tccggacccccctcctcgtcctccgccgctacggaggaaccacgggttaagaagcttctt
gttcaacacatcgaaacagtacaccattctgaagctgttgaaaatgttttgcactctctt
ttgcttgctgactcaaattccaaagagataaagagcaagacaaaggaatggaatgacaga
atcaagcaagacaaaaaaacagaccagctacggtcggcagccaggcagagacatgaggat
ctaggaagaaatgctcgctttgcacaaatatggaagagtcggaaaggagaaaagaatgaa
gctgacgaatcacttagagaaatatgccatctttatgatgctgtccaagtagatcctgat
gaagagaggcatccagcagaaccacggattacttctttcgaagagggtgctgttttgtgc
aactttcttccacttatacgggagtacttgccatcagttgctgaggaaatcgagtcagat
attatttcattggcacaatcagaagattcagaagtttatgacatctatactgtcaaggag
gtggatgatacaaacatggaggatacatcagcatcttcatatccacggttacaagtggat
gatggcgaagatgaatgctatgatgatgactacccatacgacacagatgattcaaatgct
gaagacaatccacttttcgattatcctgaagaattgtcagaggatgaggatgatggtagc
aatgacgaagatccttttggagacagggaaggttctggttcggagtatgaaaaggaagaa
gtagaggtggatgcagacgaacaatggtga
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