Panicum virgatum (switchgrass): 120662129
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Entry
120662129 CDS
T07260
Name
(RefSeq) xylose isomerase-like
KO
K01805
xylose isomerase [EC:
5.3.1.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00040
Pentose and glucuronate interconversions
pvir00051
Fructose and mannose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120662129
00051 Fructose and mannose metabolism
120662129
Enzymes [BR:
pvir01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.5 xylose isomerase
120662129
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Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
120662129
NCBI-ProteinID:
XP_039797171
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Position
2N:complement(68465643..68470052)
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AA seq
480 aa
AA seq
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MRGSRLLLLLVAASSLCLYAVIAVQQTCPADLDGKCEGAASDDWEGEFFPGIPKIKYEGP
TSKNPLAYKWYNAEEVILGKKMKDWMRFSVAFWHTFRGTGGDPFGAPTKVWPWEDGTNSL
AMAKRRMRAHFEFMEKLGVDRWCFHDRDIAPDGKTLEETNANLDEIVELAKQLQSETNIK
PLWGTAQLFMHPRYMHGAATSPEVKVYAYAAAQVKKALEVTHYLGGENYVFWGGREGYQT
LLNTDMKRELDHLANFLQAAVDYKKKIGFKGTLLIEPKPQEPTKHQYDWDVATAFAFLQK
YGLTGEFKINVECNHATLSGHSCHHELETARINGLLGNIDANTGDPQVGWDTDQFMTDIA
EATLVMSSVVKNGGLAPGGFNFDAKLRRESTDVEDMFLAHISGMDTLARGLRNVAKLLED
GSLDELVRKRYQSFDSEIGALIEAGKGDFVTLERKVLEWGEPTVPSGKQELAEMLFQSAL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaggggctccaggctcttgctgttactagtggcggcgtcatctctctgcctctatgct
gtgatcgctgtgcagcagacttgccctgctgaccttgatggcaaatgcgagggtgccgct
tcagatgattgggagggagagttcttccctggcatcccgaaaatcaagtatgagggcccg
acaagcaagaaccctcttgcttataagtggtataatgcagaggaagtgattctcggaaag
aagatgaaggattggatgcggttcagtgttgccttttggcacacattccgtggtactggt
ggtgatccttttggtgccccgacaaaggtttggccttgggaggacggcacaaattcactg
gccatggctaagagaagaatgagagctcacttcgaattcatggagaagctgggagttgac
agatggtgcttccatgatagagatattgccccagatggcaaaacactcgaagaaacaaat
gctaacttggacgagatagtcgagctggcaaagcaactccagagtgagaccaatatcaag
ccattgtggggaaccgcacagctctttatgcatccacgttacatgcatggagctgctact
agcccagaggttaaagtatatgcttatgcagctgcacaagttaagaaagctttggaggtc
actcactacctaggtggtgaaaattatgtgttttggggtggaagagagggataccaaact
cttttgaatactgacatgaagagagaacttgaccatctggctaactttcttcaagctgct
gttgactacaagaagaagattggatttaaaggaacattgttgatagagcctaaaccacag
gaaccaacaaaacaccagtatgactgggatgttgcaactgcattcgcttttctacagaag
tatggtcttacaggagagttcaagattaatgttgagtgcaaccatgctactctatctgga
catagctgccatcatgaactggagactgcacgaattaatgggttgcttggaaatattgat
gcaaacactggtgatccacaagtcggttgggacactgatcagttcatgacagacatcgca
gaggctactttggttatgtcaagtgtagttaagaatggtggacttgcacctggtggattc
aactttgatgccaaattgcggagggaaagtactgatgttgaggacatgtttcttgctcat
atctcaggaatggacaccctagcccgtggcctccgcaatgtcgccaagttgcttgaggat
ggttccttggatgagcttgtccgcaagcgctaccagagctttgacagtgagattggtgcc
ttgatcgaggccgggaaaggagactttgtgacgctagaaaggaaggttctggagtggggc
gaacccactgttccatccggcaagcaggagctggccgagatgctgttccagtctgctctg
tag
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