Panicum virgatum (switchgrass): 120662186
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Entry
120662186 CDS
T07260
Name
(RefSeq) nuclear transcription factor Y subunit A-10-like isoform X1
KO
K08064
nuclear transcription factor Y, alpha
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120662186
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120662186
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
120662186
NCBI-ProteinID:
XP_039797246
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All DBs
Position
2K:complement(4765466..4770269)
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AA seq
293 aa
AA seq
DB search
MRSAAAMGFQEHGLAFQVITDGGGGATAAPWWAAAAAPQGFAAKFPIISSGDSDPPQDLK
YHEPLAAAMAAYPELHKYHGPFDLALGQSMVRVVGLQPWQFKSVNLSLDILAFYPLSFEL
KVWSNNAGAGQRQSFGLYSPYGAQAMHGRVLLPPAIAAEEPVYVNAKQFKGILRRRLARA
RAARDLRASRNRKPYLHESRHLHALRRARGSGGRFLNTRSLAAGDPPPQLASTPLGGPEP
TEGGASKAARLHPAKERQEDVFLSSLTNMAGDGDGKARWVGAAPRGCCDLLRA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtgcggcggcaatgggcttccaggagcacgggctagccttccaggtgatcacc
gacggcggcggcggcgcaaccgcagcgccgtggtgggcggctgctgctgctcctcagggg
tttgccgccaagtttccgatcatcagctcaggcgattctgaccctccgcaagacctcaaa
taccatgagcctttggcagcagccatggccgcctacccggagttgcacaagtaccatggc
cctttcgatctggcccttgggcagtccatggtgagggtcgtaggcttgcagccatggcag
ttcaagtccgtaaatctaagcctcgacatcttggccttttaccccttgtcttttgaactg
aaggtgtggagcaacaatgccggtgccggtcagcgccagagctttggcctgtactctcca
tatggagctcaagctatgcacggcagggtgctcctgccgccggcgatcgccgccgaggag
ccggtctacgtgaacgccaagcagttcaaaggcatcctccggcggcgcctggcccgtgcc
agggcggcgagggacctcagggcctccaggaaccgcaagccatacctccacgagtcgcgg
cacctgcacgcgctccgccgcgcgcggggctccggcggccgcttcctcaacaccaggagc
ctcgccgccggcgacccgccgccccagctcgccagcacgcccctgggagggccggaaccc
actgagggcggcgcgtcgaaggcggcaaggctgcacccggcgaaggaacgccaggaggac
gtcttcctctcgtcgttgacgaacatggccggcgacggcgacggcaaggcgaggtgggtc
ggagcggcgccgcggggctgctgcgacctgctcagggcgtga
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