Panicum virgatum (switchgrass): 120662190
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Entry
120662190 CDS
T07260
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 33A-like
KO
K27472
mediator of RNA polymerase II transcription subunit 33
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120662190
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
120662190
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GFIT
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NCBI-GeneID:
120662190
NCBI-ProteinID:
XP_039797247
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Position
2N:69106014..69116045
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AA seq
1301 aa
AA seq
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MAAVKASEARGDPPLLRAVELARVAAGEGIGIPSADLAAILVSNLCFAHNSPSLWKLVGQ
AMASRLLCPLHVLALLTPRVLPQRRVQPEAYRLYLELIKGNVTSSSLFMEAGPNRDKITK
SIADALQLSKNYGYCGTEFGHVVVMFVLAVVTKLIDSILEDCGLPSGMAEGQESVYAIEG
PQPMDLDVKKVSTENQNEHREQLRRKNTVMALDVLHMMVADRKIQSFLRLIFLNMPEKFS
YLSQRLSSIEAHKVALETLLPAGHKINDLLIDIRRVCNANYQPNNKHIVDVLGNTRSGGS
LLGQLTGAGRAACWIIFDIYVENAIDGKHLSGISAIEVLKETTKTLQVLNEASWPETFKA
LWISALRLVQRAREPLEGPIPHLDARLCMLLALIPLSVAAILKEESDMFGAEGSKILPRR
QGLISSLQDLIQYSGLLVPPSSVMNAANSAASKAAIFKSNYNAGVVNSSMVAQIDSSTKA
VGNMLHLIIEACISRNLIDTSAYLWPGYVVSSGPLKDTTLPQESPWLNFIKGAPLSGPLI
DALVATPASSVGELDKLYNIAANGSEEEKTAAAKILCGASLVRGWNIQEHVVGMVVKLLS
ASLPSDSSTSTPGSHYLAQMSTLNEILLGVAYGDAIHILSLYGMVPDVAAALMPLCEGFG
SIAPPPNHKSTILGETSVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVRMELTLDYL
LLMRNNRIDFTNSSAPSRDSYNNMGSVNEVPAQPVYIDSFPKLRAWYFQNQACIASTLSG
LCNKNPVHQVANKILSMICRKMNKVGVSSGNLSSTSSSSVSGSSVNASDDSFQRPAVPAW
EFLEAVPFVLEAVLTACAHGRLSSRDLTTSLRDLVDFLPASLAAIVSYFSAEITRGIWKP
VPMNGIEWPSPGASLHSIEAEIKEILASAGVQIHSCYPRGVPPMLPLPMAALVSLTITFK
LDRSLEYIQGVIGQALENCAGASSWPSMPITAALWTQKVRRWHDFIVLSCLRSPFGRDKD
AVAQLVQSCFSSFLQSSSSGSDITANRGVGALLGDSITNQGLRLPMAPGFIYLRTCRTFH
DSYFVSEVILKQVIEWSHKLANGWSSNRPPQLKSGRTSLSCAASMAHQVAMLGGGLLCIA
GGSLVVQVLYEETLPTLLLSAREHSLKDPGPVSSTLQGYAMANMLFFCGSLLWGADRISP
VIKLSFLSRRPRVVGTHMDFIAGVLDGHILLGCDPGTWKAYVSRFVFLVVKFVPSWLRDI
KLDTLKKIAAGLRSWREHDLALSLLERGGPLAISAVVETML
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgaaggcgtcggaggcgcgcggggacccgccgctgctgcgggcggtggag
ctggcccgcgtcgccgcgggggagggcattgggatccccagcgcggacctggcggcgatc
ctcgtctccaacctatgcttcgcgcacaactcgccctcgctctggaagctcgtcggccag
gccatggcctcccgcctcctctgcccgctccatgtgctcgcactcctcacccccagggtt
ctcccgcagcggcgagtgcagcctgaggcgtatcgactctacctggagctcatcaagggt
aacgtcacgtcctcctcgctgtttatggaggccgggcctaatcgtgacaagataacaaag
tccattgctgatgctttgcaactatcaaagaattatggatattgtggaacagaatttggg
catgttgtcgtcatgtttgtgttggcagttgtcaccaaactgattgatagcatacttgag
gactgtggccttccatctggtatggcagaggggcaagagagtgtatacgccattgaagga
ccacagcctatggacctagatgtcaaaaaggtctctacggagaaccaaaatgagcatcgc
gaacagttgcgccggaagaacactgtcatggccttggatgtgctgcatatgatggttgct
gatagaaagattcaatcatttctgcgcttgatattcctgaacatgcctgaaaagttcagt
tatctaagccagaggttgagttctattgaagctcacaaagtggccttggagactctactg
cctgctggacacaaaattaatgacttgttaatagatatccggagagtctgcaatgcaaac
tatcaaccgaataacaaacatattgtggatgttcttggtaatacgagatcaggtggctct
ctactgggtcaacttactggagctgggagggctgcctgctggataatatttgatatttat
gtggaaaatgcaattgatgggaagcatctaagtggtatatcagctattgaggttttaaaa
gaaacgacgaagacactgcaagtacttaatgaggcaagctggccggaaacatttaaagct
ctttggatttccgcacttcgtcttgttcagcgggctagagaacctcttgaaggaccaatt
cctcatctagatgcgaggttatgcatgttgttagctcttataccactatcggttgctgca
attcttaaagaagaaagtgatatgttcggagctgaaggaagcaaaattcttccacgaaga
caagggctcatatcttccctccaggatctgatccagtattcaggacttcttgtgccacct
tcatcagtgatgaatgcagctaattctgcagcctcgaaagctgcaatattcaagtccaat
tataatgctggggttgtcaactctagcatggttgcccagattgactcgtcgacaaaagct
gttgggaatatgcttcatcttattattgaggcctgtatctcgagaaatttgattgataca
tctgcttacttatggcctggttatgttgtatcatctgggcctttgaaagatacaacttta
ccccaagaatcaccgtggttaaactttattaaaggggctccactttctggtccacttatt
gatgctctggttgctactcctgcttcaagtgttggggaattggacaaattatacaatata
gcagcaaatggttcagaagaagaaaaaacagctgctgccaagattctttgcggcgcgtcg
cttgtccgtggctggaacattcaggaacatgtggttggtatggtggtcaagctattatca
gcttcattgccctcagattcctcaacctcaacacctgggagccactaccttgctcagatg
tctacattaaatgaaatcttactcggtgtggcttatggtgatgccatccatattctttca
ttgtatggaatggttccagatgttgctgcagctttgatgccactatgcgaaggttttggg
tcaatagcacccccacctaaccacaagtccaccatccttggggaaacatctgtttattcg
gtcttctcttgtgcatttctttgtctccttcgcttgtggaagttttataagcctcctcaa
gagtactgtcttgctggtcgtggaggctcagtaagaatggaacttactctggactatctg
ttgttgatgcgcaataaccgcattgatttcacaaattcgtctgcccctagtagggattct
tacaataatatgggctcagtcaacgaggtccctgctcaaccggtttatattgattctttc
ccgaagttaagggcttggtatttccagaatcaagcttgcatagcatctaccctttcgggt
ctttgcaacaaaaaccctgtccatcaagttgcaaacaaaattttgagtatgatttgccga
aaaatgaataaagttggggtatcatctggtaatctttcatccacttctagtagtagtgtc
agtggttcctctgtaaatgcatcagatgattctttccaaaggcctgcagttcctgcatgg
gaatttttagaagctgttccttttgtccttgaagctgttcttacagcatgtgctcatggg
agactttccagccgagacttgactacaagcttaagggatctggtggactttttgcctgct
tctcttgctgcgatcgttagctacttctcagcagaaattacacgaggaatctggaaacct
gtcccgatgaatggaattgaatggcctagccctggtgcttctcttcattccattgaagct
gaaataaaggaaattcttgcatctgctggtgttcagattcacagctgctatccacgtggt
gtgccgccaatgcttcctttaccgatggctgcgcttgtcagcttgacaattacatttaag
ctagataggagtttggagtacattcaaggagtcattggacaagcactagagaactgtgca
ggggcaagttcctggccgagcatgcccattactgcggcattatggacacagaaagtgcga
agatggcatgacttcatcgtcctctcttgtttgcgttctccatttggcagagacaaagat
gcagttgcacagctcgtccaaagttgcttttcgtcctttctgcagtcgtcatccagtggt
tctgacataactgcaaatcgtggagttggggctttacttggggactcaatcacgaatcaa
ggtcttaggctcccaatggcacctggtttcatctacctgagaacatgtcgaacattccac
gacagttactttgtcagtgaagtgatcctcaagcaagttattgagtggtcccataaactt
gcaaatggatggtcttctaacaggcctccgcagttgaagtcagggcggacatcactatct
tgtgcagcctccatggctcatcaggtcgcgatgcttggtggtgggctcctatgcattgca
ggtggatcacttgtggtccaggtgctgtatgaggaaacattgccaacactgcttctgtca
gccagagaacatagtttgaaagaccctgggccagtttctagcacactccaaggttatgcc
atggccaacatgcttttcttctgtggcagcctgctttggggagcggataggatttctcct
gtcataaaattgtctttcctctcaaggaggccacgggtggtgggaacccacatggatttc
atagctggtgtattggatggacacattctcctcggctgcgatccgggtacctggaaagca
tatgtgtcgcgctttgtgttcctggtggtgaagtttgttccatcatggttgcgtgacata
aaactggacacgctaaagaagatagcagctgggcttcggagttggcgtgaacatgacctt
gctctgtctcttcttgagcgaggggggccgctggcaatctctgctgtagtcgagacgatg
ttgtga
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