Panicum virgatum (switchgrass): 120662192
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Entry
120662192 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 7
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120662192
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120662192
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120662192
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120662192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
MetW
Motif
Other DBs
NCBI-GeneID:
120662192
NCBI-ProteinID:
XP_039797249
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Position
2N:69146493..69151648
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AA seq
732 aa
AA seq
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MGTHALPLTYPARAHEVEVTNRPASSSVTGLNKPHCAAGPAAIKANPVATQRNATASSNS
AVGKHSEQFGRLQCDDQRRGRGRRQPQEEEAMKAQPLLPAALKRRRGPRVAVLALVFCSL
LVPFAFLFDRAPSGYVTTEERHRQEVVLPSLDHAEKRGRPGAISGRRQDAPEKKIPRGSA
GVIHQHVPEKRISKVSAGVIDQHKQIDSHSTSGGAKSKAPPAPKVEPSKAVAESTRETRE
ISKDVQGRQKVAKADEVEKAKACQLEFGSYCLWSIEHKEVMKDSIVKRLKDQLFVARSYY
PSIAKLQGHEALTQEMKQNIQEHERVLSVSTVDADLPSFINKRMEQMERTIARSKSCTVD
CKNVDRKLRQILDMTEDEAHFHMKQSAFLYNLGAQTLQKSHHCLNMRLTLEYFKSSSLDS
DDSPSGKFNSPKYMHYVILSKNVLAASVVINSTVSSCKEPGNLAFHILTDAQNFYAMKYW
FARNSYKNAVIHVINYEAIILEKLPKYNIQQLYLPEEFRVLIRSIKQPTENTRMEYLSLF
SHSHFLIPEIFKYLNKVVLLDDDVVVQRDLSFLWNIDMGDKVNGAVKFCGLKLGQMRNVL
GKTAYDPKSCAWMSGVNLINLDKWREHNVTENYLLLMKKFKFKDERSLRAAAIPLSSLSF
QHLIYPLDEKLTLAGLGYDYGIDEEVARRAASLHYNGNMKPWLELGIPDYKKYWRRFLVR
GDRFMDECNVNP
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgggtacgcacgccctgcctttaacgtacccggcacgagcgcacgaggttgaggtcacc
aaccgaccagcatccagttcagtcactgggctcaacaaaccgcactgcgccgccggcccg
gccgcgatcaaagcaaatcccgtcgcaacgcaacgcaacgcaactgcctcctcgaactcg
gcagtcggcaagcattcggagcaattcggtcgcctgcagtgcgatgatcagcggagaggt
cgcgggcgccgccaaccccaggaggaggaggccatgaaggcgcagccgctgctgccggcg
gcgctcaagaggcggaggggcccgcgcgtggcggtgctggcgctcgtcttctgctccctg
ctcgtgcccttcgccttcctcttcgaccgcgccccctccgggtacgtgacgacggaggag
cggcaccgacaggaggtcgttctgccttcgttggatcacgccgagaagaggggtcgtcct
ggcgctatcagcggacggagacaggatgcaccagaaaagaagatccccagaggcagtgca
ggagtcattcatcagcatgtaccagagaagaggatctccaaagttagtgcaggagtcatt
gatcagcataagcaaattgatagccattcgacaagtggtggtgctaaatcaaaagctcct
ccagcaccaaaagttgaaccatcaaaggctgtggcggaatcaactcgagagacaagagag
attagcaaagatgtacaagggcgacaaaaagttgcaaaagctgatgaagtggaaaaggcg
aaggcttgtcaacttgaatttggaagttattgtctctggtccatagaacacaaagaagta
atgaaagattccatagtgaagaggctaaaagaccaactctttgtagcacgctcatactat
ccgagtattgcaaaacttcaaggacatgaagctctgactcaggaaatgaagcaaaacata
caagaacatgagagggtgcttagtgtatcaacagtcgatgctgatctaccatcatttatc
aacaagaggatggagcagatggagcgaacaattgcgagatccaaatcttgcacggtggac
tgtaagaatgttgacaggaagcttcgccaaatacttgatatgactgaggatgaagctcat
tttcatatgaagcagagtgcattcctgtacaaccttggtgcccagacattacagaaaagt
catcattgccttaatatgaggttgacgttagagtatttcaaatcatcttcattggattca
gatgattctccttctggcaagttcaacagtccaaaatatatgcactatgttatactatct
aagaacgttcttgcggcttctgtagtgatcaactcaactgtgagcagttgcaaggagcca
ggcaatcttgcttttcatatcctaactgatgctcagaacttctatgccatgaaatactgg
tttgccaggaattcatataaaaatgcagttatccatgttataaactatgaggccattatt
ttggagaagctgccaaagtataatatccagcagctgtacttgccagaggagtttcgtgtt
ctcattaggagcattaagcagcctactgagaacacaagaatggaatacctgtcacttttc
agccattcacatttccttattccagaaatattcaagtatctaaacaaggtggttctgttg
gatgatgatgtagttgttcaacgtgatctgtctttcttgtggaatattgatatgggagac
aaggttaatggtgctgtcaaattttgtggtctgaaactgggtcaaatgagaaatgtactg
ggcaaaacagcatatgatcccaagtcatgtgcatggatgtcaggcgtgaatttgattaat
ttggataaatggagggaacataatgttacagagaactatctgctgctcatgaaaaagttt
aaattcaaggatgagcgatctctgcgagcggcagcaattcctctaagctcgctatccttc
caacatctcatctatcccctagatgaaaaattgaccctggctggacttggatatgattat
ggaattgatgaagaggttgctcggagagccgcatcgttgcactacaatggcaacatgaaa
ccttggcttgaactaggtataccggactacaaaaagtactggaggaggtttcttgttcga
ggagaccgatttatggacgagtgcaacgtaaatccttga
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