Panicum virgatum (switchgrass): 120662219
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Entry
120662219 CDS
T07260
Name
(RefSeq) transcription factor JAMYB-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120662219
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120662219
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
120662219
NCBI-ProteinID:
XP_039797293
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Position
2N:complement(69481077..69482730)
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AA seq
310 aa
AA seq
DB search
MAAPDQREMMMSSNEESSVAPGDLCRGPWTVEEDLLLVNYIAAHGEGRWNALARCAGLRR
TGKSCRLRWLNYLRPDLRRGSITAQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYW
RTRVQKHARQLNCDVNSQRFKDLMRYLWMPRLLERIGDDARATATPPHLPAGPVDDVEVE
LSCTTAASSSSVSTPTDGTQQQQQQLVSPPAPPATSAFGESAPSGYDGSYSSYSNTGTMW
DTLCHPPQTDYHPTTAHLEAAACSWSDESLLAPGLSLPYGDMGMVGLPELADTMWGAGAD
DLWYTQIMGL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcctgatcagcgagagatgatgatgagcagcaacgaggagtcgtcggtggcg
ccgggggacctctgccgcgggccgtggacggtggaggaggacctgttgctcgtcaactac
atcgccgcgcacggcgagggacgctggaacgcgctggcacgatgcgcggggcttcgccgg
acgggcaagagctgccgcctgcggtggctcaactacctgcgcccggacctccggcgcggc
agcatcacggcgcaggagcagctgctcatcctggagctgcactcgcgctggggcaaccgc
tggtccaagatcgctcagcacctgcccggccgcaccgacaacgagatcaagaactactgg
cgcacgcgggtgcagaagcacgccaggcagctcaactgcgacgtcaacagccagcggttc
aaggacctcatgaggtacctctggatgccgcgcctactcgagcgcatcggggacgacgcc
cgtgccaccgccacgccgccgcacctcccggcggggcccgtcgacgacgtggaggtggag
ctgtcctgcaccacggccgcgtcgtcgtcctccgtgtcgacgcccacggacggcacgcag
cagcagcagcagcagctcgtgtcgccgccggcgccaccggcgacctccgcctttggcgag
agcgcgcccagcggctacgacggatcctattcttcctacagcaacactggtaccatgtgg
gacacgttgtgccacccaccacaaacagactaccacccgacgacggcgcacttggaggct
gcagcttgcagctggtccgacgagtcgctgctggccccgggtctctctctcccctacggc
gacatggggatggtggggttgccggagctcgccgacaccatgtggggcgccggtgccgac
gacctgtggtacacgcagataatggggttgtga
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