Panicum virgatum (switchgrass): 120662222
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Entry
120662222 CDS
T07260
Name
(RefSeq) transcription factor TGA2.1 isoform X1
KO
K14431
transcription factor TGA
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120662222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120662222
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
120662222
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Gene cluster
GFIT
Motif
Pfam:
DOG1
bZIP_1
bZIP_2
bZIP_Maf
U62_UL91
Motif
Other DBs
NCBI-GeneID:
120662222
NCBI-ProteinID:
XP_039797300
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Position
2N:complement(69533894..69538734)
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AA seq
338 aa
AA seq
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MADASSRTDTSTVLEDNDKNRRMENGQIVAAVPSNSSDRSDRSDKPLDQKTLRRLAQNRE
AARKSRLRKKAYVQQLESSKLKLAQLEQELQKARQQGIFISSSGDQTHAMSGNGNVSGAL
TFDIEYTRWLEEQNKQINELRTAVNAHASDSDLRLIVDGIMAHYDEIFKVKGVAAKADVF
HILSGMWKTPAERCFLWLGGFRPSELLKLLANHLEPLTEQQLLGLTNLQQSSQQAEDALS
QGMEALQQSLAETLAGSLGPSGSSGNVANYMGQMAMAMGKLGTLENFLRQADNLRQQTLH
QMQRILTIRQASRALLAIHDYFSRLRALSSLWLARPRE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgctagttcaaggactgacacctcaactgttttagaagacaacgacaagaat
cgaaggatggaaaacggacaaattgtggcagctgtgccttctaattcttcagataggtct
gataggtccgacaaacctttggaccaaaagaccttgcgacggctagcccaaaatcgtgag
gcagcaagaaaaagtcggctgaggaaaaaggcatatgtgcaacagctagagagcagtaag
ctgaaacttgcgcaactggagcaggaactccagaaagctcgccagcagggaatcttcatt
tccagctctggcgaccaaacccatgccatgagtggaaatggtaatgtttcaggagcgttg
acttttgacatagagtatactagatggctagaggagcagaataagcagataaatgagttg
aggactgcagtgaatgctcatgcaagtgacagtgatctacgacttattgtagatggcata
atggcacattatgatgaaatattcaaggtcaaaggtgttgctgcgaaggctgatgtattt
catatactttcaggcatgtggaagacacctgcagaaaggtgcttcctctggcttgggggt
tttcgtccatctgagcttttaaagctcttagcaaatcacctggagcccctaactgagcaa
caattgctgggattgaccaacctccagcaatcttcccagcaggcagaggatgctttgtca
cagggcatggaagcgctgcagcaatcattggcagagactttggctggatctcttggtcca
tcaggttcttcaggcaatgtggcaaactacatgggtcagatggccatggccatgggcaaa
cttgggacacttgagaattttcttcggcaggccgacaatctgcgacagcagacattgcat
caaatgcaacggattctaacaatccgacaggcttctcgtgctcttcttgctatccatgac
tatttttctcggttgcgtgctttaagttctctgtggcttgctaggccacgtgaataa
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