Panicum virgatum (switchgrass): 120662238
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Entry
120662238 CDS
T07260
Name
(RefSeq) serine/threonine-protein kinase TIO-like
KO
K06228
fused [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120662238
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pvir03037
]
120662238
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120662238
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: Other
ULK family [OT]
120662238
Cilium and associated proteins [BR:
pvir03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
120662238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Arm
HEAT
HEAT_2
HEAT_EZ
ABC1
Haspin_kinase
Kinase-like
Pkinase_fungal
RIO1
APH
YrbL-PhoP_reg
PDS5
Kdo
Motif
Other DBs
NCBI-GeneID:
120662238
NCBI-ProteinID:
XP_039797334
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All DBs
Position
2N:complement(69693420..69703714)
Genome browser
AA seq
1331 aa
AA seq
DB search
MGIEDYHVIDLVGEGSFGKVYKGRRKYTRQTVAMKFILKHGKTDKDIHNLRQEIEILRKL
KHENIIEMVDAFETPQEFCVVTEFAQGELFEVLEDDKCLPEEQVQAIAKQLVKALYYLHS
NRIIHRDMKPQNILIGKGSVVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYN
HTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDNMSAHFKSFLKGLLNKM
PQSRLTWPALLEHPFVKDDSMASAADTLTAPFEVKGSEDTRRTEEIQTSRNQPSPADPQS
TITATNRENASDKPKGNRKLDGPMQATEDHHGSSTGAVPESRSPSECTALDKLEKVSQTV
KGANSIVEDGEAMSTIVSPIKTWLTNHPSSPRELNIDGANQSLRIIKNLIDAGSCQPYAV
KIDICMLLEFTNLIIRTKLSNAYGLVTKCLPIARKLLDTNDEVILSSYDRYWSSLYELYS
QILNSTVDPSGRISRESTACLALMLSRVISGLKASMSSEGTKAVDESLLKIIDHARRSQL
LELLCECLITLGSDIISGSTNMVPAACEACKAIWYLAHAVDMSISAHHFSFPLATSWRQI
HSMQEQGSMADSNSTNLINIFVKSFLASRPMQVAVYHCLHNGLESAIHACLQLISRACLQ
NVSFCAIICRPWNSPSDVDAVEYGGDGTIVSDTFSLLSLCGSYFNKESKQNSNQKCKLSN
PHALVVHCCLALAAIAACLKSEGGFSASVILTSSQKKQRSRLSVLAQLSSVDDTVKSCLQ
PHCASAMLALSSLVSLENGGQTRSSLCETALALFPRMATLHTLLKLWLSDGSEALCRYNA
GLLNLFGLRDGSIGMLETRLKWGGPLAIEQASSVGIPQILIRLLTDGFSKETSDGKGGST
NRSGLSPLGVVWTLSALSQCLPGGVFREILYRREQLKLLTGLLSDIHLKALEAWTGLGGG
KRGVRELINAVVDILAFPFVAVQSSPNMPSASASINSGFLLNVASPGGRIGTENKEMLKT
IEQNMPQYIQVLLEVGIPGCMLRCLDYVDMEDLARPLAIVAKMAGYRPLALQLLKEGLLD
PSRVAGLLEGPIAKETLLDFLMIVSDLARMSKDFYAPIDKAGLVGFLKNYLSNEDPDIRA
KACSAIGNMCRHSSYFYSPLAANKVIQLVVDRCSDPDKRTRKFACFAVGNAAYHNDMLYE
ELRRSIPQLTTLLLGPEEDKTKGNAAGALSNLVRNSDILCEDIVSQGAIQALLKMVGSYS
TVALSPSRRDALTESPLRIVLFALRKMCDHTLCRNFLRSSELLPVIVHLRQSPDPTISEY
ASAIASRACQA
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atggggatagaagattaccatgtcatcgacctcgtcggggagggctcctttggcaaggtt
tacaagggcaggcgcaagtacactcgccagacggttgcgatgaagttcattcttaagcat
ggcaagaccgataaggacatacacaaccttaggcaggagatcgagatcctaaggaaactc
aaacacgagaacataatcgaaatggtcgatgctttcgaaacccctcaggagttttgcgtt
gtcacagagtttgctcagggagaactgtttgaagtgcttgaggacgataaatgccttcca
gaggaacaagttcaggcgattgctaagcagctggtaaaagcattgtactacttgcattcc
aatcgtattattcaccgggatatgaaacctcagaacatccttattgggaaaggatctgtt
gtaaagctttgcgacttcgggtttgctcgcgccatgtcagctaatactgttgtgttacgc
tccataaaagggacccctttatacatggctccagaacttgtgagagaacagccatataac
cacacagctgatttgtggtcccttggggttatcttgtatgaactgtttgttggacagccc
ccattttatacaaattcggtctatgcacttatacggcacatcgtcaaggatcctgttaaa
tatccagataacatgagtgcacactttaagagcttcctgaaaggtctactaaacaagatg
cctcaaagtagattaacctggccagcattactagagcacccatttgtcaaagatgattcg
atggcatcagcagctgataccctaactgcaccttttgaagttaaaggatcggaggatact
cggagaacagaagaaatccaaacttcaaggaaccagccttccccagctgacccacaaagt
acaattactgctaccaatagggaaaatgcctctgataaaccaaaaggcaacagaaaacta
gatggccctatgcaagctactgaggaccaccatggttcatctactggtgctgttcctgag
agccgctctccctcagagtgtactgctttggataaactggaaaaggtttcacaaacagta
aaaggtgcaaacagcattgttgaagacggtgaagcaatgtcaaccattgtcagccccatc
aaaacttggctgactaatcatccaagttcgcccagggaactgaacattgatggagcaaat
cagtcactcagaattattaaaaatttaattgatgctgggtcatgtcaaccttatgcagtg
aagattgacatctgtatgcttcttgagtttacaaatctcattatcagaacgaagctttca
aatgcctatggccttgtaacgaagtgcctgccaattgcacgaaaactactggatacaaat
gatgaagttatcttaagctcttatgacagatactggtcctccctgtatgagctttattct
cagatcctgaactctacagtggacccatctggaagaatttctcgagagtcaactgcctgc
cttgctctgatgttgtctcgggttatctctgggttgaaagcaagtatgtcatccgaaggc
acaaaggcagttgatgaaagtctccttaagattattgatcacgcaaggaggtcacagttg
ctggagctcttatgtgaatgtctgataaccttgggttcagacataatatcaggttctacg
aacatggtacctgctgcttgtgaggcatgcaaggctatttggtatctagctcatgctgtt
gacatgtccattagtgcacaccatttttcatttcctttagctacctcatggagacaaatt
cactctatgcaagagcaaggctcgatggcagattcaaactctaccaatctgataaacata
tttgtcaaatcatttctggcctcacgaccaatgcaggttgcagtttaccactgcttgcat
aatggtctagaatcagctattcatgcttgtcttcagcttatctcaagggcctgtctgcag
aatgtttctttctgtgccatcatttgtcgtccatggaattcaccatctgatgttgatgca
gtagaatatggtggagatggaacgattgtgtctgacacgttttcgttattgtcactgtgt
ggatcatattttaataaggaatctaagcagaatagcaatcagaaatgcaagctatccaac
cctcatgctttggtagtgcactgctgccttgcattagcggcaatagctgcatgtctcaag
tcagagggggggttttcagcatcagttatcctaacaagttcccagaaaaaacagcggtcc
cggctctcagttcttgcacagctctcatcagttgatgatacagtcaagagttgcctgcaa
ccacactgtgcatctgcaatgctcgcgctttcgtcacttgtttcgcttgaaaacggaggt
cagaccagatcttctctttgtgaaactgcccttgctttgtttcctcgtatggcaacactg
cacacgctgctgaagctgtggctatctgatggaagtgaagcactttgtcgatataatgct
ggccttctaaatctttttggactccgtgatggaagtattgggatgctagagacgagattg
aaatggggagggccattggccattgaacaagcctcctcagttggcatcccacagatccta
atccgcttgcttacagatggtttctcaaaagagacatctgacgggaaaggtggttcaacg
aaccgcagtgggttgtctcctctgggagttgtctggactctctctgctttatctcaatgc
cttcctggtggagttttccgtgaaattctgtatagaagggagcagttaaagctcttaact
gggctgttgtctgatatacacctcaaggcattggaagcctggacgggtcttggtggtggg
aagaggggagttcgagagctgataaacgcagttgttgatatcttggcatttccatttgtt
gcagtgcaaagttctccaaacatgccatcagcatctgcatccatcaatagtggcttcctg
cttaacgttgcatcacctggtggacgaatcggtaccgagaacaaggaaatgctcaaaact
atcgagcaaaacatgcctcagtacattcaagttctgctggaggttggtattcctggatgt
atgcttcgctgtcttgattatgttgacatggaagatctagctaggcccttggccattgta
gcaaaaatggcaggctaccgaccacttgctttgcagcttctcaaagaaggccttctagat
cctagtagagtagcaggattactcgagggtcctattgcaaaggagactctgcttgatttc
cttatgattgtttctgaccttgcgcggatgtcaaaggatttttatgcacccattgataaa
gctggacttgttggatttctgaagaactacttgtctaatgaagatcctgatataagagca
aaagcttgcagtgccattggcaacatgtgtcgccacagctcctacttttatagtccactt
gcagcaaataaggtgatccagctcgtggttgacagatgttctgatcctgacaaacgcaca
cggaagtttgcatgttttgctgttggcaatgctgcttatcataatgacatgctgtatgaa
gaactaaggcggtccataccgcaactcactacgttacttcttggtcctgaggaggataaa
accaaaggcaatgctgcaggtgcgctcagtaatctagtgaggaactctgacatactttgt
gaagacattgtctcccaaggtgcaattcaggcactgctgaagatggtcggcagttactct
acggttgccctgagccccagtaggcgtgacgctcttactgaatcgccgctaagaatcgtg
ctcttcgccctgcgcaagatgtgcgaccacaccctctgcaggaacttcctccgatcttca
gagctgctcccagtcattgttcacctacggcagtcacccgatccaacaatttccgagtac
gcttctgccatcgcaagcagggcgtgccaagcctga
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