Panicum virgatum (switchgrass): 120662254
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Entry
120662254 CDS
T07260
Name
(RefSeq) ubiquitin-activating enzyme E1 3 isoform X1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120662254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120662254
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120662254
Enzymes [BR:
pvir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
120662254
Ubiquitin system [BR:
pvir04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
120662254
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120662254
Exosomal proteins of other body fluids (saliva and urine)
120662254
Exosomal proteins of colorectal cancer cells
120662254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_FCCH
E1_UFD
E1_4HB
PLAC9
Motif
Other DBs
NCBI-GeneID:
120662254
NCBI-ProteinID:
XP_039797356
LinkDB
All DBs
Position
2N:69818286..69823599
Genome browser
AA seq
1061 aa
AA seq
DB search
MRCLRLLRRGFLSMLPSKRSAGADGGQPKRPKVGESPPAAAASNGTRNGAPPAIDEDLHS
RQLAVYGRETMRRLFASDVLVSGLNGLGAEIAKNLALAGVRSVTVHDVKDVDMWDLSGNF
FLSEQDIGKNRALACISKLQELNNAVLVSALTEELTKEHLSKFQAVIFTDISLDKAYEFD
DYCHSHQPPISFIKAEVCGLFGSVFCDFGPEFTVLDVDGEDPHTGIIASISNDSPAMVSC
VDDERLEFQDGDLVVFSEVQGMEKLNDGKPRKVKNARPFSFSIEEDTGSYGVYTKGGIVT
KVKEPKVLRFKSLRDAMKDPGDFLLSDFSKFERSPVIHLAFQALDNFRKEHGRYPTAGCE
QDAQSFLKFVADINEASIDSKQEKIDEKLLRHFASGSRAVLNPMAAMFGGIVGQEVVKAC
SGKFHPLYQFFYFDSVESLPTYQLDPQDLKPSNSRYDAQISVFGSKLQKKLQDANIFIVG
SGALGCEFLKNLALMGVSCSSKSKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAAAA
ARAINPSLQIDALQNRACPDTENVFHDTFWDGLDVVINALDNVNARMYMDMRCLYFQKPL
LESGTLGAKCNTQIVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGL
LEKIPNEVNSFLSNPTQYAAAMRKAGDAQARELLERVSECLGKERCITFEDCITWARLRF
EDYFSNRVKQLTFTFPEDASTSTGTPFWSAPKRFPRPLQFSATDSSHIQLIMSASILRAE
SFGIAIPDWAKNTSKLADAVNKVAVPEFEPKKGVNIVTDEKATNLSSTSVDDVAVIDDLL
SKLEECAKNLPPGFQMKPIQFEKDDDTNFHMDLISGFANMRARNYSIPVVDKLKAKFIAG
RIIPAIATSTAMATGLVCLELYKVIAGEHPIEDYRNTFANLALPLFSIAEPVPAKVMKHQ
DLSWTVWDRWLVKGDLTVAELLQWFSDKGLSAYSMSCGTSLLYNSMFPRHKERLQKKVVD
VAREVTKVEVPEYRRHIDIVVACEDNDGNDIDIPLVSVYFR
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcttacggttgctgcgcaggggattcctctccatgcttccttccaagaggtcc
gcgggtgctgacggcggccagcccaagaggcccaaggtgggggaatcaccgccagcagcc
gccgccagtaacggcactcggaatggggcgccgccggcgatcgacgaggacctgcacagc
aggcagctcgccgtctacggcagggagacaatgcgccgcctcttcgcctccgacgtcctc
gtctctggactcaatggcctcggtgctgagattgcaaagaatctagctcttgctggagtc
agatctgtcactgtacatgatgtcaaagatgtggacatgtgggacctgtctggcaatttc
tttttgtccgagcaagatattggaaagaacagggcccttgcctgtatctccaagttgcag
gagctgaacaatgctgtcctggtatctgctctaacagaggaattgacaaaagagcactta
tctaagttccaggctgttattttcaccgatataagcttagacaaggcttatgaatttgat
gactattgccacagccaccagcctccaatctccttcatcaaagctgaagtttgtggcctt
tttggtagtgtcttttgtgattttggacctgagtttaccgtacttgatgttgatggtgaa
gatccacatactggtataattgcatctatcagtaatgacagtcctgcaatggtatcctgt
gttgatgatgagcggcttgagtttcaggacggtgatcttgttgttttctctgaggtccag
ggcatggaaaaactgaatgatggtaaaccaagaaaggtaaaaaatgctaggccattttca
tttagcattgaggaggatacaggtagctatggtgtttatacaaaaggtggaattgttaca
aaagtgaaggaaccaaaggttctacgtttcaagtcactaagagatgctatgaaagatcct
ggcgatttccttctgagtgacttctcaaagtttgaacgttcacctgtaattcacctagca
tttcaagctctggataattttaggaaagaacatgggcgatatcctaccgctggttgtgag
caggatgctcaaagctttctcaagttcgttgctgatattaatgaagcatcaattgattct
aagcaggaaaaaattgatgagaagttgctccggcatttcgcaagtggttctcgagctgtt
ttgaacccaatggccgcaatgtttggtggtattgttggtcaggaagttgtgaaggcatgt
tcagggaaattccatccgctttaccagttcttctacttcgactctgttgaatctctccca
acataccagttggatccccaagacttgaagccatcaaacagccgatatgatgctcagatc
tctgtatttggttccaagcttcagaagaagctgcaagatgcaaatattttcattgtgggt
tctggtgcccttggatgtgaattcttgaagaaccttgccttaatgggtgtctcttgcagc
tccaagtcgaagctaactataacagatgatgatgtcatcgagaaaagcaatttgagccgc
caatttctattccgtgactggaacattggacaggcaaagtctactgtggctgccgctgct
gccagagctatcaaccccagtctccaaattgacgcacttcagaaccgtgcctgtccagat
actgaaaatgtgttccatgacacattctgggacggactggatgttgtcatcaatgcactt
gataatgttaacgctaggatgtatatggacatgaggtgcctgtacttccagaagccacta
ctggagtcagggacgttgggtgcaaagtgcaatactcaaatagtcattcctcaccttact
gaaaattatggagcttcaagagacccaccagagaagcaggcacccatgtgcacagttcat
tcttttccacacaatattgatcattgcttgacatgggctcgttcagagtttgagggtttg
ctagagaaaataccaaatgaagtaaattcttttctgtctaatcctactcaatatgctgct
gccatgaggaaggcaggtgatgcccaggcaagagaactacttgaacgtgtctctgaatgt
cttggcaaggagcgatgcattacatttgaggactgcataacttgggctcgacttaggttt
gaggattatttctcaaaccgtgtgaagcagctcacattcacttttcctgaagatgcttct
actagcacaggcactcctttctggtctgccccaaagcgctttcctcggcctctgcaattt
tcagccaccgactcatctcacattcagctcattatgtctgcttcaatactgagagcggag
tcatttggaattgctatacctgactgggcaaagaacacaagtaagctggctgatgcagtc
aataaggtcgcagttcctgaatttgagccaaagaaaggggtgaatattgtgacagatgag
aaggctactaacctttctagcacctcagttgatgatgttgctgttatcgatgaccttctg
tccaagttagaagaatgtgcaaagaatctgccaccagggttccaaatgaaacctatccaa
ttcgagaaggatgatgacactaattttcacatggatttaatatctgggtttgcgaacatg
cgtgcaaggaactacagcattcctgtggttgacaagttgaaggccaagttcatcgctgga
agaatcatccctgctattgcaacttcaacagccatggccacaggtcttgtgtgccttgag
ctatacaaggttattgctggggagcaccctattgaggactaccgcaacacatttgccaac
ctagcgctgcctctgttctcgatcgccgagcctgttccagccaaggtgatgaagcaccaa
gaccttagctggaccgtatgggatcgatggttggtcaagggcgacctgactgttgcggag
ctcctgcaatggttcagcgacaagggcctcagtgcttacagcatgtcctgtggcacgtct
ctgctgtacaatagcatgtttccgaggcacaaggaaagactgcagaagaaggttgttgat
gtcgcgagggaagtcactaaggtggaggtccctgagtacaggaggcacatagatattgtg
gtggcctgcgaggacaatgatgggaacgacattgatatccctctcgtatccgtctacttc
cgatag
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