Panicum virgatum (switchgrass): 120662254
Help
Entry
120662254 CDS
T07260
Name
(RefSeq) ubiquitin-activating enzyme E1 3 isoform X1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120662254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120662254
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120662254
Enzymes [BR:
pvir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
120662254
Ubiquitin system [BR:
pvir04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
120662254
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120662254
Exosomal proteins of other body fluids (saliva and urine)
120662254
Exosomal proteins of colorectal cancer cells
120662254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiF
UBA_E1_SCCH
E1_FCCH
E1_UFD
E1_4HB
BilD_C
Motif
Other DBs
NCBI-GeneID:
120662254
NCBI-ProteinID:
XP_039797356
LinkDB
All DBs
Position
2N:69818286..69823599
Genome browser
AA seq
1061 aa
AA seq
DB search
MRCLRLLRRGFLSMLPSKRSAGADGGQPKRPKVGESPPAAAASNGTRNGAPPAIDEDLHS
RQLAVYGRETMRRLFASDVLVSGLNGLGAEIAKNLALAGVRSVTVHDVKDVDMWDLSGNF
FLSEQDIGKNRALACISKLQELNNAVLVSALTEELTKEHLSKFQAVIFTDISLDKAYEFD
DYCHSHQPPISFIKAEVCGLFGSVFCDFGPEFTVLDVDGEDPHTGIIASISNDSPAMVSC
VDDERLEFQDGDLVVFSEVQGMEKLNDGKPRKVKNARPFSFSIEEDTGSYGVYTKGGIVT
KVKEPKVLRFKSLRDAMKDPGDFLLSDFSKFERSPVIHLAFQALDNFRKEHGRYPTAGCE
QDAQSFLKFVADINEASIDSKQEKIDEKLLRHFASGSRAVLNPMAAMFGGIVGQEVVKAC
SGKFHPLYQFFYFDSVESLPTYQLDPQDLKPSNSRYDAQISVFGSKLQKKLQDANIFIVG
SGALGCEFLKNLALMGVSCSSKSKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAAAA
ARAINPSLQIDALQNRACPDTENVFHDTFWDGLDVVINALDNVNARMYMDMRCLYFQKPL
LESGTLGAKCNTQIVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGL
LEKIPNEVNSFLSNPTQYAAAMRKAGDAQARELLERVSECLGKERCITFEDCITWARLRF
EDYFSNRVKQLTFTFPEDASTSTGTPFWSAPKRFPRPLQFSATDSSHIQLIMSASILRAE
SFGIAIPDWAKNTSKLADAVNKVAVPEFEPKKGVNIVTDEKATNLSSTSVDDVAVIDDLL
SKLEECAKNLPPGFQMKPIQFEKDDDTNFHMDLISGFANMRARNYSIPVVDKLKAKFIAG
RIIPAIATSTAMATGLVCLELYKVIAGEHPIEDYRNTFANLALPLFSIAEPVPAKVMKHQ
DLSWTVWDRWLVKGDLTVAELLQWFSDKGLSAYSMSCGTSLLYNSMFPRHKERLQKKVVD
VAREVTKVEVPEYRRHIDIVVACEDNDGNDIDIPLVSVYFR
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcttacggttgctgcgcaggggattcctctccatgcttccttccaagaggtcc
gcgggtgctgacggcggccagcccaagaggcccaaggtgggggaatcaccgccagcagcc
gccgccagtaacggcactcggaatggggcgccgccggcgatcgacgaggacctgcacagc
aggcagctcgccgtctacggcagggagacaatgcgccgcctcttcgcctccgacgtcctc
gtctctggactcaatggcctcggtgctgagattgcaaagaatctagctcttgctggagtc
agatctgtcactgtacatgatgtcaaagatgtggacatgtgggacctgtctggcaatttc
tttttgtccgagcaagatattggaaagaacagggcccttgcctgtatctccaagttgcag
gagctgaacaatgctgtcctggtatctgctctaacagaggaattgacaaaagagcactta
tctaagttccaggctgttattttcaccgatataagcttagacaaggcttatgaatttgat
gactattgccacagccaccagcctccaatctccttcatcaaagctgaagtttgtggcctt
tttggtagtgtcttttgtgattttggacctgagtttaccgtacttgatgttgatggtgaa
gatccacatactggtataattgcatctatcagtaatgacagtcctgcaatggtatcctgt
gttgatgatgagcggcttgagtttcaggacggtgatcttgttgttttctctgaggtccag
ggcatggaaaaactgaatgatggtaaaccaagaaaggtaaaaaatgctaggccattttca
tttagcattgaggaggatacaggtagctatggtgtttatacaaaaggtggaattgttaca
aaagtgaaggaaccaaaggttctacgtttcaagtcactaagagatgctatgaaagatcct
ggcgatttccttctgagtgacttctcaaagtttgaacgttcacctgtaattcacctagca
tttcaagctctggataattttaggaaagaacatgggcgatatcctaccgctggttgtgag
caggatgctcaaagctttctcaagttcgttgctgatattaatgaagcatcaattgattct
aagcaggaaaaaattgatgagaagttgctccggcatttcgcaagtggttctcgagctgtt
ttgaacccaatggccgcaatgtttggtggtattgttggtcaggaagttgtgaaggcatgt
tcagggaaattccatccgctttaccagttcttctacttcgactctgttgaatctctccca
acataccagttggatccccaagacttgaagccatcaaacagccgatatgatgctcagatc
tctgtatttggttccaagcttcagaagaagctgcaagatgcaaatattttcattgtgggt
tctggtgcccttggatgtgaattcttgaagaaccttgccttaatgggtgtctcttgcagc
tccaagtcgaagctaactataacagatgatgatgtcatcgagaaaagcaatttgagccgc
caatttctattccgtgactggaacattggacaggcaaagtctactgtggctgccgctgct
gccagagctatcaaccccagtctccaaattgacgcacttcagaaccgtgcctgtccagat
actgaaaatgtgttccatgacacattctgggacggactggatgttgtcatcaatgcactt
gataatgttaacgctaggatgtatatggacatgaggtgcctgtacttccagaagccacta
ctggagtcagggacgttgggtgcaaagtgcaatactcaaatagtcattcctcaccttact
gaaaattatggagcttcaagagacccaccagagaagcaggcacccatgtgcacagttcat
tcttttccacacaatattgatcattgcttgacatgggctcgttcagagtttgagggtttg
ctagagaaaataccaaatgaagtaaattcttttctgtctaatcctactcaatatgctgct
gccatgaggaaggcaggtgatgcccaggcaagagaactacttgaacgtgtctctgaatgt
cttggcaaggagcgatgcattacatttgaggactgcataacttgggctcgacttaggttt
gaggattatttctcaaaccgtgtgaagcagctcacattcacttttcctgaagatgcttct
actagcacaggcactcctttctggtctgccccaaagcgctttcctcggcctctgcaattt
tcagccaccgactcatctcacattcagctcattatgtctgcttcaatactgagagcggag
tcatttggaattgctatacctgactgggcaaagaacacaagtaagctggctgatgcagtc
aataaggtcgcagttcctgaatttgagccaaagaaaggggtgaatattgtgacagatgag
aaggctactaacctttctagcacctcagttgatgatgttgctgttatcgatgaccttctg
tccaagttagaagaatgtgcaaagaatctgccaccagggttccaaatgaaacctatccaa
ttcgagaaggatgatgacactaattttcacatggatttaatatctgggtttgcgaacatg
cgtgcaaggaactacagcattcctgtggttgacaagttgaaggccaagttcatcgctgga
agaatcatccctgctattgcaacttcaacagccatggccacaggtcttgtgtgccttgag
ctatacaaggttattgctggggagcaccctattgaggactaccgcaacacatttgccaac
ctagcgctgcctctgttctcgatcgccgagcctgttccagccaaggtgatgaagcaccaa
gaccttagctggaccgtatgggatcgatggttggtcaagggcgacctgactgttgcggag
ctcctgcaatggttcagcgacaagggcctcagtgcttacagcatgtcctgtggcacgtct
ctgctgtacaatagcatgtttccgaggcacaaggaaagactgcagaagaaggttgttgat
gtcgcgagggaagtcactaaggtggaggtccctgagtacaggaggcacatagatattgtg
gtggcctgcgaggacaatgatgggaacgacattgatatccctctcgtatccgtctacttc
cgatag
DBGET
integrated database retrieval system
