Panicum virgatum (switchgrass): 120662283
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Entry
120662283 CDS
T07260
Name
(RefSeq) protein YABBY 1-like
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120662283
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
120662283
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
HMG_box
Ccdc124
Zn_ribbon_12
Zwilch
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
120662283
NCBI-ProteinID:
XP_039797401
LinkDB
All DBs
Position
2K:4837724..4843481
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AA seq
168 aa
AA seq
DB search
MSTQFASEHVCYVNCNYCNTILVVNVPNNCSYNIVTVKCGHCTMVLSMDLSPFHQARIVP
DNQVAQTRGLHQYNNFGSYEPASRNLRNQSMYQMSNNQPQVPPMRPPEKRQRVPSAYNRF
IKEEIQRIKTSNPEISHREAFSAAAKNWAHLPRLHFGLSVADGGGGSS
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacccagtttgcatccgagcatgtctgctatgtcaactgcaactattgcaacacc
atcctggtggtgaatgtgccaaacaattgttcctacaacatcgtgactgttaaatgtggg
cattgcacaatggtgctctcaatggaccttagtcctttccaccaggcacgcattgttcca
gacaaccaggttgcccagaccagaggacttcatcaatacaataattttgggagctatgag
ccagcctccagaaatctacgaaatcagtccatgtaccagatgtcaaacaatcagccacaa
gtgccaccaatgcgacccccagagaagagacagcgtgttccgtcagcatacaacagattc
atcaaggaagaaatacaaaggataaagaccagcaatccagagattagccacagggaggca
ttcagtgctgcggcaaagaattgggctcatcttcctcggctccatttcggcctgagtgtc
gccgacggtggcggcggcagcagctag
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integrated database retrieval system
