Panicum virgatum (switchgrass): 120662512
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Entry
120662512 CDS
T07260
Name
(RefSeq) alpha-galactosidase-like
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00052
Galactose metabolism
pvir00561
Glycerolipid metabolism
pvir00600
Sphingolipid metabolism
pvir00603
Glycosphingolipid biosynthesis - globo and isoglobo series
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
120662512
09103 Lipid metabolism
00561 Glycerolipid metabolism
120662512
00600 Sphingolipid metabolism
120662512
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
120662512
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
120662512
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GFIT
Motif
Pfam:
Melibiase_2
Melibiase_C
Melibiase
Melibiase_2_C
Glyco_hydro_97
Raffinose_syn
Motif
Other DBs
NCBI-GeneID:
120662512
NCBI-ProteinID:
XP_039797579
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Position
2N:27335677..27338761
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AA seq
399 aa
AA seq
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MAGKAPLCAFFLLLLSTSAAAIRPARSVAATARRAALENGLGRTPQMGWNSWNHFHCKIN
EEIIREIADAMVDNGLAKLGYEYINIDDCWAAYDRDSQGNLAANASTFPSGIPALANYVH
GKGLKLGIYGDAGSRTCSKLMPGSLGYEDKDAKTFASWGVDYLKYDNCNNQGISPQLRYN
TMSKALLNSGRNIFFSLCEWGVDDPGTWAGGVGNSWRTTGDIKDTWASMTAIADKNDKWA
SYAGPGGWNDPDMLEVGNGGMTTEEYRSHFSIWALVKAPLLIGCDIRSMSKETKEILSNE
NVIAVNQDELGVQGHKVQQDGDQEVWAGPLSGGKIAIVLWNRGSTKASITASWSSIGLNA
STVADAHDLWTDGVISSVQGELNETVDSHACKMYVVTPK
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaaggcacccttgtgtgctttcttcctcctcttgctatcgacatcagcagca
gcaatcaggcctgcgagatcagtggcggcgacggctaggagagcggcactggagaatggc
cttggccggactccacagatgggttggaatagttggaaccacttccactgcaaaataaac
gaagagataattcgagaaatcgctgatgctatggtggataatggcctcgcaaagcttggt
tatgagtatatcaacatagatgattgctgggcagcttatgatagggactcccagggcaat
ctagctgcaaatgcgtcaacattcccatcgggaataccagccttggcaaactatgtgcat
ggaaaagggctcaagctagggatctatggtgatgcagggtcacggacttgcagcaaattg
atgcccggttctcttgggtacgaagacaaagatgcaaaaaccttcgcatcttggggagtc
gactacttaaagtatgacaactgcaacaaccagggaataagtcctcagctaagatataac
acgatgagcaaagcacttctgaattctgggaggaatattttcttctccctctgtgaatgg
ggggtggatgacccagggacatgggcaggtggtgtaggaaacagttggagaactacgggt
gacatcaaggacacttgggcaagcatgacagctattgccgacaagaatgacaagtgggca
tcatatgctggccctggtggatggaatgacccagacatgctagaagttggaaatgggggg
atgacaacagaagagtaccgctcccatttcagcatatgggctctagtgaaggcacccctc
ttgattggctgtgacatccgctcaatgagcaaagaaaccaaggaaatcctcagcaatgaa
aatgtcattgcagttaaccaagatgagcttggggtacaagggcacaaagtgcaacaagat
ggagaccaagaagtatgggccggtccactgagtggaggtaaaattgctattgtcctatgg
aacagaggatcaaccaaagcatccatcactgccagctggagcagcattggtctgaatgca
tcgactgtcgctgatgctcatgatctgtggacagatggggttatatcatcagttcaagga
gaactaaatgaaacagtggattctcatgcttgcaagatgtatgttgtgacaccaaaatag
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