Panicum virgatum (switchgrass): 120662543
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Entry
120662543 CDS
T07260
Name
(RefSeq) probable nucleolar protein 5-1
KO
K14565
nucleolar protein 58
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120662543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120662543
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
120662543
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Gene cluster
GFIT
Motif
Pfam:
NOP5NT
Motif
Other DBs
NCBI-GeneID:
120662543
NCBI-ProteinID:
XP_039797606
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Position
2N:complement(34491645..34494404)
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AA seq
416 aa
AA seq
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MAMDDEYAYINPERTRTLLETPSGFALFDVDDDALKEADDTWVYFRDVDTAKNVMFTLGF
VKFDDKTTAWDGQTGPSNELIRLIRRYCKGRKHLIVQSADIKVIIEEKLNVKCSYDKNVV
DELVWGMKNVLREFILQEKYNVTREYRCLPVSKGLKQCLKDHLINLSTTELDANFIPKIG
LLHYLNITLKQVPRMLRESYGDHVCRIGEHIKSNSMYARVLARILVPELAPEYDFCKMLS
PDLALKIQEADKSATKYRDEQLTMHDREIIMGALSILLSVPKQRDDIMICVKLMEAEMCT
RLMLLEDPHEKFVRVPTNLKHSTFRRTLLETPSGFAIFDVNEDVFRWPRHMWVRFIDARE
ARQVVLALGFVNVKDNSIAQNSYDGPGQELSSLILNLCGHDTKLIVQDDAHRGKTC
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggacgacgagtatgcgtatattaatcctgaacggacgagaacactactggag
acaccctcaggcttcgccctgtttgatgttgatgatgatgcactcaaagaagctgatgat
acctgggtgtattttagggatgtagatactgcaaaaaatgttatgtttacccttggcttt
gtgaagtttgatgacaaaactactgcttgggatggtcagacaggtcctagcaatgaactc
atccgtctaattcgaagatactgcaagggtagaaagcatcttattgttcaaagtgctgat
attaaagtcattattgaggaaaagctgaatgtcaaatgttcatacgacaaaaatgttgtt
gatgaactcgtttgggggatgaagaatgtccttcgtgagtttattctccaagaaaagtac
aacgtaacacgggagtaccggtgtctcccggtgagcaagggattgaaacagtgtttaaaa
gatcatttgatcaatttgtctacaacagagcttgatgcaaatttcataccaaaaattggc
ttattacactatctcaacataactttaaagcaagttcccaggatgttgagggagtcatat
ggtgaccatgtttgtagaattggtgaacatattaaaagtaactcgatgtatgccagagtc
cttgcaagaattcttgtccctgagttggcaccagaatatgatttctgtaagatgttgtca
cctgacttagcactgaagatccaagaagcagataaatctgcaactaaatatcgagatgaa
cagcttaccatgcatgacagggaaattattatgggagctcttagtatcctgttgtcagtt
ccaaaacaaagagatgacattatgatctgtgtcaagcttatggaagcagaaatgtgtaca
agattgatgcttcttgaagatccacatgaaaaatttgtaagggtacctacaaatttgaag
cactcaacttttaggaggacactcctcgagactccttcaggttttgctatttttgatgtt
aacgaggatgtgtttagatggcctcggcatatgtgggtacggtttatcgatgcaagggaa
gcacgtcaggttgtcttagccctcggtttcgtaaatgttaaagacaattctattgctcag
aacagttatgatggtcctggccaggagctgagtagccttattctaaatctgtgtggacat
gatactaaattgattgttcaagatgatgctcatagaggaaaaacttgttag
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