KEGG   Panicum virgatum (switchgrass): 120662563
Entry
120662563         CDS       T07260                                 
Name
(RefSeq) polygalacturonase QRT2-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00040  Pentose and glucuronate interconversions
pvir01100  Metabolic pathways
Module
pvir_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    120662563
Enzymes [BR:pvir01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     120662563
SSDB
Motif
Pfam: Glyco_hydro_28 NosD Beta_helix
Other DBs
NCBI-GeneID: 120662563
NCBI-ProteinID: XP_039797621
LinkDB
Position
2N:36591611..36592781
AA seq 297 aa
MMRKYIFHPFIFISESLLMWILLAFSFLQPCKQAPTALTFSSCKNLRLENLKLRNSQQIH
MSVEDCSHVKLAHLSITAPGASPNTDGIHIARSRRVHVTDCTIKTGDDCISIEDGTENLH
VKNILCGPGHGISIGSLGDHGSEAYVINVTVDSVTLHGTTNGARIKTWQGGRGYAKNIIF
RNTIMDSVWNPIIIDQNYCDSAAPCKKQKSAVEVSNVLFKNIRGTSASKEAIKLSCSSGV
PCHGIALENVKLTLKGGSGVAKSTCENARWRKSGTVAPQPLYPHFRTIMSILEFRFS
NT seq 894 nt   +upstreamnt  +downstreamnt
atgatgaggaaatatatattccatcctttcatttttatttctgaaagcttgctgatgtgg
attcttcttgcattttcctttcttcagccatgcaaacaagctccaacggctttgacattc
tcctcctgtaaaaatctcagattggaaaatctgaaactgaggaacagccagcaaatccac
atgtcagtagaggattgcagccacgtcaaattagcccacctatcaatcacagccccaggg
gctagccctaacaccgatggcatccacatcgcccgcagcagacgtgttcacgtcacagac
tgcacaatcaagaccggagacgactgcatctccattgaggacggaactgagaacctccat
gtcaagaacatcctgtgtggaccggggcatggaatcagcattggcagcctaggcgaccat
ggatctgaagcttatgttatcaatgtcacagtcgacagcgtgacactgcatgggacgaca
aacggagctcgcatcaagacatggcaaggggggaggggctatgcaaagaacatcatcttc
cggaacacgatcatggacagcgtatggaacccaatcatcatcgaccagaactattgtgac
tctgccgcaccctgcaagaaacagaaatctgcggtagaggtgagcaatgtgctgttcaag
aacatcaggggcacaagtgcatcaaaagaggctatcaagctgagctgcagctcaggcgtg
ccttgccatggcatagccctggagaacgtgaagctgactctcaagggcggcagtggtgtt
gccaagagcacttgtgagaatgcaagatggaggaaatcagggacggtagctccacagcca
ttgtacccccattttagaactattatgagcatacttgaatttagattttcataa

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