Panicum virgatum (switchgrass): 120662652
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Entry
120662652 CDS
T07260
Name
(RefSeq) syntaxin-132-like
KO
K08486
syntaxin 1B/2/3
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120662652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120662652
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120662652
Membrane trafficking [BR:
pvir04131
]
SNARE
Syntaxin (Qa)
Stx-PM
120662652
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
120662652
Exosomal proteins of other body fluids (saliva and urine)
120662652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Vac_Fusion
ParB
Fusion_gly
cas_Cpf1_2nd
FapA
DUF6548
DUF2207_C
COG2p_C
Motif
Other DBs
NCBI-GeneID:
120662652
NCBI-ProteinID:
XP_039797692
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All DBs
Position
2K:complement(5265448..5269799)
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AA seq
303 aa
AA seq
DB search
MNNLLSDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDVIESLIAKLTNLLNKLQ
TANEESKAVTKASAMKAIKQRMEKDIDEVGKIARQAKTKVDELEKDNLSNRQKPGCGKGS
AVDRSREQTTGAVKKKLKERMDDFQALREAIRQEYREVVERRVFTVTGNRPNEETIDDLI
ETGKSEQIFKDAIQQQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQG
DMINNIETHVSNATNHIQQGVSALQNAKKLQKNSRKWMCYAIIILLVIVVIVVVGIIQPW
KKG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacctcctctcggattcctttgagctccctcggcgggactcttcgagagatgcg
gacattgaaatgggaatgcatcaggctgatgcttcagacaacttaaaggatttcttgaaa
aaggttgatgtaattgagagtctaattgcaaagctgacaaatctattgaataagcttcag
actgcaaatgaggaatccaaagcagttacaaaagcaagtgccatgaaagcaatcaagcag
cggatggagaaagatattgatgaagtggggaaaattgctcgtcaggcgaagacaaaagtt
gatgaactcgaaaaagataacttatcaaataggcaaaaacctggatgcggaaaggggtct
gccgtggaccggtcaagagaacagactactggagcagttaaaaagaaattgaaggagcgg
atggatgattttcaggctttacgagaagcaatcaggcaagaataccgtgaggttgttgaa
agaagggtttttactgtgaccggtaatcgtcccaatgaagagacaatcgatgacctgata
gagactggaaaaagtgaacaaatcttcaaagacgcaatccaacagcagggaagaggccag
atactggacaccgttgctgaaatacaggagcgacatgatgctgtgagggatctagagagg
aagctacttgagttgcaacagatattcatggacatggcagttcttgttgaggctcaagga
gacatgatcaacaacatcgagacacatgtttcgaacgctaccaatcacatacagcaaggc
gttagcgctctccagaatgccaagaaactgcagaagaattcgagaaagtggatgtgctat
gccatcatcatactgctggtgatagtggtgatcgttgttgtgggaatcatccagccatgg
aagaaggggtga
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