KEGG   Panicum virgatum (switchgrass): 120662652
Entry
120662652         CDS       T07260                                 
Name
(RefSeq) syntaxin-132-like
  KO
K08486  syntaxin 1B/2/3
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    120662652
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120662652
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120662652
Membrane trafficking [BR:pvir04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    120662652
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   120662652
  Exosomal proteins of other body fluids (saliva and urine)
   120662652
SSDB
Motif
Pfam: Syntaxin SNARE Vac_Fusion ParB Fusion_gly cas_Cpf1_2nd FapA DUF6548 DUF2207_C COG2p_C
Other DBs
NCBI-GeneID: 120662652
NCBI-ProteinID: XP_039797692
LinkDB
Position
2K:complement(5265448..5269799)
AA seq 303 aa
MNNLLSDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDVIESLIAKLTNLLNKLQ
TANEESKAVTKASAMKAIKQRMEKDIDEVGKIARQAKTKVDELEKDNLSNRQKPGCGKGS
AVDRSREQTTGAVKKKLKERMDDFQALREAIRQEYREVVERRVFTVTGNRPNEETIDDLI
ETGKSEQIFKDAIQQQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQG
DMINNIETHVSNATNHIQQGVSALQNAKKLQKNSRKWMCYAIIILLVIVVIVVVGIIQPW
KKG
NT seq 912 nt   +upstreamnt  +downstreamnt
atgaacaacctcctctcggattcctttgagctccctcggcgggactcttcgagagatgcg
gacattgaaatgggaatgcatcaggctgatgcttcagacaacttaaaggatttcttgaaa
aaggttgatgtaattgagagtctaattgcaaagctgacaaatctattgaataagcttcag
actgcaaatgaggaatccaaagcagttacaaaagcaagtgccatgaaagcaatcaagcag
cggatggagaaagatattgatgaagtggggaaaattgctcgtcaggcgaagacaaaagtt
gatgaactcgaaaaagataacttatcaaataggcaaaaacctggatgcggaaaggggtct
gccgtggaccggtcaagagaacagactactggagcagttaaaaagaaattgaaggagcgg
atggatgattttcaggctttacgagaagcaatcaggcaagaataccgtgaggttgttgaa
agaagggtttttactgtgaccggtaatcgtcccaatgaagagacaatcgatgacctgata
gagactggaaaaagtgaacaaatcttcaaagacgcaatccaacagcagggaagaggccag
atactggacaccgttgctgaaatacaggagcgacatgatgctgtgagggatctagagagg
aagctacttgagttgcaacagatattcatggacatggcagttcttgttgaggctcaagga
gacatgatcaacaacatcgagacacatgtttcgaacgctaccaatcacatacagcaaggc
gttagcgctctccagaatgccaagaaactgcagaagaattcgagaaagtggatgtgctat
gccatcatcatactgctggtgatagtggtgatcgttgttgtgggaatcatccagccatgg
aagaaggggtga

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