Panicum virgatum (switchgrass): 120662674
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Entry
120662674 CDS
T07260
Name
(RefSeq) glutamate receptor 2.8-like
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvir04040
]
120662674
Ion channels [BR:
pvir04040
]
Ligand-gated channels
Glutamate (ionotropic)
120662674
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Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
Lig_chan-Glu_bd
SBP_bac_3
CcdB
Motif
Other DBs
NCBI-GeneID:
120662674
NCBI-ProteinID:
XP_039797704
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Position
2N:complement(45842209..45847814)
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AA seq
890 aa
AA seq
DB search
MEIANSIILLLLISAGIGGAAQNASGRAHEVHVGVILDLGSLVGKIAITSISLALEDFYS
AHQNYSTKLVLHIRDSMSDDVRAAAEALDLLENYRVETIIGPEKSSQAIFISDLGTKSHV
PIISFTVTSPTISPSSLPYFVRATLNDSAQVSCIASTIKAYGWRKAVPIYEDTEYGRGII
PYLVDVLQEDNVHVPYRSVIPLSATSEQISIELYKLMTMQTRVYIVHMSSALASTLFMKA
KELGMMEKGYVWIITDGVTNLIDSLHPSVVESMNGALGIQFYVPKSTKLNNFTVRWNMRY
QIDNPTDPPSKLSIFGLWSYDTIWALAQAAEKVGLANATFQKPISKQKSTDLETLETSSN
GPELLKEILHSTFIGLSGRFDLSDRQLAVSTFKVINVIGRGWRDIGFWTAQNGLVRKLNQ
SQSTRIHSSLLPDLNPVIWPGESIDIPRGFEVPANGKKLRVGVRSSGYQQFIKVEKDQIT
GATKATGLSVDVFEEAVKILPYAVPYEYVLFGSPEDTSSGSYDDFVYQVHLKVYDIVIGD
ITIRYNRTFYADFTVPYTESGIAMVVPVKDTVNKNTWIFLKPLTPGMWLGSIVFFIYTVV
AEEIVERFLSRIVMIVWLCFLLVVTSSYTANLTSMLTVQQLQPTVNHIQELLKSGEIVGY
HRGSYVKGLLEELGFESSKIKPYDTPDDFHNALSRGSSNGGIAALMHEVPYIKLFLANHC
KGYTMVGPIYKAAGFGYALAKGNPLLGDISQAMLNVTGGDTMIQIEKKWMEYQNDCQNVG
PVTGSSSLTFANFRGLFILTGAASTSSLFIALIIYAYKKQHRSTNMKNDNKQVGENRTDE
ENNEPQEGNQGVVTEECVQFRDGSEQVCNRNPHTSTAACNGSAANEITKS
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggagatagcaaacagtatcatcctgctcctcttgatatcagccggcattggtggtgct
gcacaaaatgcttctggacgagcacatgaggtacatgttggagtcatccttgacttgggg
tccttggtcggcaaaatagcaatcaccagcatttcactggctctagaagacttctattct
gctcaccaaaactatagcacaaaacttgttctccacatcagggattcgatgagcgatgat
gtccgggctgcagctgaagctcttgatttgctggagaattacagagtagaaactatcatt
ggtcctgagaaatcttcacaggctatatttatctcagaccttggaactaaaagtcatgtt
ccaatcatctcgttcactgtaacaagcccaactatatcccctagcagtcttccatatttt
gtccgagcaacattaaatgactcagcacaagtgagttgcattgcctcaaccattaaggca
tatggatggagaaaggcggtgcctatctatgaagacactgaatatggtagaggtatcata
ccatacctagtcgatgtcctccaagaagataatgttcatgttccctaccgcagtgtgatt
cctctgtcagcaactagtgaacaaatttctatagaactatacaagttaatgacaatgcaa
acaagggtctatattgtgcacatgtcctcagcgttggcctccaccctcttcatgaaggca
aaagaactaggaatgatggaaaaaggatatgtatggatcataaccgatggagtaaccaat
ctcatagattctctgcatccttctgttgtggaatcaatgaacggtgccctgggtatccaa
ttttatgttcccaaatcaacaaaactgaacaacttcactgtaaggtggaatatgaggtac
caaattgacaatccgactgatccaccatcgaaattgagcatatttggactgtggagctat
gatacaatctgggcactagcacaagctgcagaaaaggttggacttgccaatgccacattt
caaaaaccaatatccaaacaaaaatcaacagacttggaaaccttggagacatctagtaat
ggtccagaactcttgaaggaaatcttgcacagtacatttataggtttgagtggcaggttt
gacctttcagataggcagctggccgtttcaacatttaaagtaataaatgttattgggaga
ggatggagagacattggattttggacagcacaaaatggacttgtacggaaattaaatcaa
tcacaatcaacaagaatacattcaagcttactgccagatcttaatcctgtgatctggccg
ggagaatccatagacatacctcgaggctttgaggttcctgcaaatgggaagaaacttcga
gttggtgtacgctcaagtggatatcaacaatttataaaggttgagaaggatcaaatcaca
ggtgcaactaaagcaactggcctttcagttgatgtatttgaagaggcagtaaagatactt
ccatatgcagtgccttatgaatatgtattatttggctctccggaggatacaagtagtgga
agctacgatgattttgtctatcaagttcatcttaaggtatacgatatagtaattggagat
ataacaatcaggtacaaccgaactttctatgctgactttactgtgccatacacagaatca
gggatagcaatggtggttcctgtgaaggacactgtaaacaagaacacatggatcttcttg
aagccactaacacctggcatgtggcttgggagcattgtgttctttatctacactgttgtt
gcagaagagattgtggaacgctttttatctcggatagtgatgattgtatggctgtgtttt
cttctggttgttacatcaagttacacagcaaacttgacatcaatgttgactgtacaacag
cttcaacctactgtaaatcatatccaagaactcctaaaaagtggagaaattgtaggatac
catcgtggctcgtatgtcaagggacttttagaagaactcggttttgaaagttccaagatc
aagccctatgatacccctgatgattttcacaatgcactttcaagaggaagcagcaatggt
ggtattgctgctctcatgcatgaagttccctatattaaactgttccttgcaaaccactgc
aaaggttacactatggttggaccaatttataaggctgcaggttttggatatgcacttgca
aagggaaatcctctacttggtgacatctcacaggcaatgctcaatgtaacagggggagat
actatgattcaaattgagaaaaaatggatggaatatcaaaatgactgccagaacgtaggt
cctgtcacaggttcaagcagcctcacctttgccaactttaggggattgttcatcctaact
ggagctgcttcaacttcttctctttttatagcattgatcatttacgcctacaagaagcag
cacaggtcaacaaacatgaaaaatgataacaagcaggtaggggaaaacagaacagatgaa
gaaaataatgagcctcaagaaggaaatcaaggagtagtaactgaagaatgcgtccagttt
agagatggatcagaacaggtgtgtaatagaaaccctcacacaagcacagctgcttgcaat
ggttcagccgccaatgaaatcaccaaatcctag
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