Panicum virgatum (switchgrass): 120662684
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Entry
120662684 CDS
T07260
Name
(RefSeq) proline--tRNA ligase, chloroplastic/mitochondrial-like isoform X1
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120662684
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120662684
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120662684
Enzymes [BR:
pvir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
120662684
Amino acid related enzymes [BR:
pvir01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
120662684
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
120662684
Prokaryotic type
120662684
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GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
ProRS-C_1
Motif
Other DBs
NCBI-GeneID:
120662684
NCBI-ProteinID:
XP_039797715
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Position
2K:5295550..5300276
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AA seq
551 aa
AA seq
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MASLLRLPSLLSPSKPLLRRRLPAARLAAAAAYRGQASEAVGAAAPAAAETRGGDREGQV
TPRSVDFNAWYTDVIAAAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMY
FPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTKWIQSY
RDLPLMINQWANVTRWEMRTKPFIRTLEFLWQEGHTAHATLEEAEKEAMQMIDVYTKFAY
EQAAIPVIPGRKSRVETFAGANRTYTIEAMMGDKKALQAGTSHNLGQNFSRAFGTQFMDE
NGQIEHVWQTSWAISTRFVGGIIMTHGDDAGLMLPPRIAPIQVIVVPIWKKGDEKATVLE
AVDSVLKILKEAGIRVKVDDSELRTPGWKFNHYEMKGIPIRIEIGPRDVTNKSVVVSRRD
VPGKQGKEFGVSMDPSILVNHIKGRLEDIQASLLHKAITFRDSNIIDVSSYGELKEAIAE
GKWARGPWSASDADELKVKEETSATIRCYPFEQLEGTKKCFMTGLDTLSACVSIRSALTT
VHVLAVKSLYC
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctgctgcgcctcccctctctcctctcgccgtccaagcccctgctccggcgc
cggctgccggcggcgaggctcgcggccgccgccgcgtacaggggccaggcctcggaggcc
gtgggcgcggcggcgccggcggccgcggagacccgcggcggggacagggaggggcaggtg
acgccgcggtccgtggacttcaacgcctggtacacggacgtgatcgccgccgccgagctc
gcggactacgggcccgtcaggggcaccatggtcatccgcccctacggatacgccatctgg
gaggccatccaggattatctgaatgtgaaattcaaagaaacagggcacagcaacatgtac
ttccctcagttcattccgtactcatttatagagaaggaagctagtcatgttgaagggttt
agtccggagcttgcactggtcaccattggaggaggaaaagaactagaggaaaagcttgtg
gtaagaccaacaagtgagaccattgtaaaccacatgttcaccaaatggattcagagctac
cgtgatcttcctctcatgattaaccagtgggctaatgtgacaagatgggaaatgaggaca
aaaccatttatccgaactcttgaatttttgtggcaagaaggtcatacagcccatgctacc
cttgaggaggcagagaaggaggcaatgcaaatgattgatgtatataccaaatttgcctat
gagcaagctgcaataccagtcattccaggtaggaaatcaagggtagagacatttgctggt
gctaatcggacttacactatagaagctatgatgggtgacaagaaggccttacaagctggg
actagtcacaacctcggccagaacttttcgcgagcttttggaacacagtttatggatgaa
aatggtcaaatcgaacacgtctggcagacctcttgggctattagtacccggttcgttggt
gggattatcatgacccatggtgatgatgctggtctaatgcttcctccaaggattgcaccc
attcaggtcatagtagtacctatatggaaaaagggtgatgagaaggctactgttctggaa
gctgtagattcagtcctaaaaatactgaaagaagcaggaattagagtcaaagtggatgac
tcagaactgcggacaccaggatggaagttcaaccattatgagatgaaagggattcctata
agaatagaaattggtcctcgtgatgtcacaaataagagtgttgtggtttctaggcgtgat
gtccccggaaagcaaggaaaggagtttggagtttccatggacccttcaatactggtgaac
catataaaggggcgtctagaggatatacaagcatcccttttacacaaagccatcacattc
cgtgatagtaacataattgatgtaagctcatatggagagctgaaggaagccattgctgaa
gggaagtgggctagaggcccttggtcagctagcgatgctgacgaactgaaggtgaaagaa
gagaccagcgccaccatcaggtgctacccgttcgagcagctggagggcaccaagaaatgc
ttcatgaccggattggataccttgtctgcctgtgtttctataagatctgcattaaccacg
gttcatgtcctagcagtaaaatccttgtactgctga
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