Panicum virgatum (switchgrass): 120662841
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Entry
120662841 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 5-like isoform X1
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120662841
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120662841
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
TRAF-mep_MATH
BACK
BTB_2
Diphthamide_syn
SAM_5
Motif
Other DBs
NCBI-GeneID:
120662841
NCBI-ProteinID:
XP_039797844
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Position
2K:complement(5465880..5470774)
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AA seq
440 aa
AA seq
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MDEDAGDASPPPAPPPPPPAHAHAPPPAAQPPTAAAAPQRDVSASPTSSRSVTETVNGSH
RFVIQGYSLAKGMGVGKHIASETFSVGGFQWAVYFYPDGKNPEDNSAYVSVFIALASEGT
DVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRTALETSDFL
KDDCLKINCTVGVVVSTIDYSRPHSIQVSDSDIGYHFGSLLDNQEGVDVILNVGGERFHA
HKLVLAARSHVFRSQFFDDESEGEKNEVDESDELREFSIDDMEPKVFKAMLHFIYRDTLV
DDNELGASSSDGSVFDSLAAKLLAAADKYDLGRLRLLCESYLCKGISVASVASTLALADR
HHAMELKAVCLKFAAENLSAVIRTEGFLYLRDNCPSLQSEILKTVAGCEEQCSSGGKSQS
VCAQLSDGGATSGRRVRPRI
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggacgccggcgacgcctcgccgccgcccgcgccccctcccccgcccccggcg
cacgcgcacgcgccccctcctgccgcgcagccccccaccgccgcggccgccccgcagcgg
gacgtgtcggcgtccccgaccagctcgcgctccgtgacggagaccgtcaacggctcccac
cggttcgtgatccagggctactcgctcgccaagggcatgggcgtgggcaagcacatcgcc
agcgagaccttttccgtcggcgggttccagtgggcggtctacttctaccccgacgggaag
aaccccgaggacaactccgcctacgtctccgtcttcatcgccctcgcctccgagggcacc
gacgtccgcgcgctcttcgagctcacgctcctcgaccagagcggcaagggcaagcacaag
gtccactcccacttcgaccgctctctcgagtccgggccgtacaccctcaagtaccgcgga
tccatgtggggttacaaacggttctttaggcgaactgccctcgagacttcagactttctt
aaagatgattgcctgaagataaattgcactgtgggtgttgttgtatcaactattgattac
tccagaccacactctatacaggtttcagactcagacatcggctaccattttggttcactg
ttggacaatcaggagggtgtggatgtcattcttaatgtgggaggagagaggtttcatgcc
cataagttggtgctggctgcacgctctcatgtattcagatctcaattttttgatgacgaa
tctgagggagagaagaacgaggttgatgaaagtgatgaactgagagagttttctattgat
gacatggagccaaaggttttcaaggcgatgcttcatttcatctatagagatacccttgtt
gatgataatgagttgggcgcatcaagctctgatggttctgtctttgattctctggcagca
aaattgttggctgcagcagacaagtatgacttaggaaggctaagattgctatgcgagtct
tacctgtgcaagggtatatcagtggcctcagttgcgagtacactagcattggctgatcgt
caccatgctatggagcttaaagctgtttgcctaaaatttgctgctgaaaatctttcagct
gtaatccggactgaggggttcctttacctcagggacaactgcccatctctgcagtcagag
atactgaaaactgttgcggggtgcgaggagcagtgcagcagtggtgggaagagccagagc
gtctgtgcgcagctctcggacggcggtgccaccagtggacgcagggttagaccaagaatc
tga
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