Panicum virgatum (switchgrass): 120662938
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Entry
120662938 CDS
T07260
Name
(RefSeq) SKP1-like protein 1A
KO
K03094
S-phase kinase-associated protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03083
Polycomb repressive complex
pvir04120
Ubiquitin mediated proteolysis
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120662938
04120 Ubiquitin mediated proteolysis
120662938
09126 Chromosome
03083 Polycomb repressive complex
120662938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120662938
04121 Ubiquitin system [BR:
pvir04121
]
120662938
03036 Chromosome and associated proteins [BR:
pvir03036
]
120662938
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
120662938
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
120662938
Cul7 complex
120662938
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
120662938
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
120662938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Motif
Other DBs
NCBI-GeneID:
120662938
NCBI-ProteinID:
XP_039797917
LinkDB
All DBs
Position
2N:66153766..66155190
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AA seq
288 aa
AA seq
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MAAEKGEKAAEEGEMGVKAAEEEKGAAAKGKGEKGATTADAEKGATAEKGEKGAPSTDEE
KGATAERKGKKRETAADEKEGAGGDGCGVGGVRRRGSLFLQRRPAAAAAAAGKGKTITLV
SSEGKPFKVSEEAARLSTVLADMIDNGCAGGNIPLPNVTARALVTVIKYCDKHAAAAAAK
PDSDHCAAEGSSTTTSVTAASEKTLAEWDSKLVDKLTLDALYDLLLASNFLDIKGLLGAA
SQKVADIIKSKTPAQVRTIFGITNDFTPEEEEEEVRKENPWAFEDEEP
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagaagggggagaaggcggcggaggagggagagatgggagtgaaggccgcg
gaggaggagaagggagcggcagcaaaggggaagggagagaagggtgcgactaccgcggat
gcggagaagggagcgacggcggagaagggcgagaagggtgcgccatccacggatgaggag
aagggagctacggcggagaggaagggaaagaagagagaaacggccgcggatgagaaggaa
ggagcagggggcgacggctgcggcgtcggaggcgtccggcgaagaggcagtcttttcctt
cagcgccgccccgccgccgccgccgccgccgccgggaaggggaagacgatcaccctggtg
agctcggaggggaagccgttcaaggtgtcggaggaggcggcgcggctgtcgacggtcctc
gccgacatgatcgacaacggctgcgccggcggcaacatcccgctacccaacgtcaccgcc
agggccctcgtcacggtgatcaagtactgcgacaagcacgccgccgccgccgccgccaag
cccgactccgaccactgcgccgcggagggcagcagcaccaccaccagcgttaccgcggca
tccgagaagacgctggctgagtgggacagcaagctcgtcgacaagctcaccctggacgcc
ctctacgacctcctcctcgcctccaacttcctcgacatcaaggggctcctcggtgccgcc
agccagaaggtcgccgacatcatcaagagcaagacaccggcgcaggtccgcacgatcttc
ggcatcaccaacgacttcaccccggaggaggaggaggaggaggtccgcaaggagaacccc
tgggctttcgaggacgaggagccttga
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