KEGG   Panicum virgatum (switchgrass): 120662938
Entry
120662938         CDS       T07260                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03083  Polycomb repressive complex
pvir04120  Ubiquitin mediated proteolysis
pvir04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120662938
   04120 Ubiquitin mediated proteolysis
    120662938
  09126 Chromosome
   03083 Polycomb repressive complex
    120662938
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120662938
   04121 Ubiquitin system [BR:pvir04121]
    120662938
   03036 Chromosome and associated proteins [BR:pvir03036]
    120662938
Membrane trafficking [BR:pvir04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    120662938
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     120662938
   Cul7 complex
     120662938
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     120662938
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     120662938
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 120662938
NCBI-ProteinID: XP_039797917
LinkDB
Position
2N:66153766..66155190
AA seq 288 aa
MAAEKGEKAAEEGEMGVKAAEEEKGAAAKGKGEKGATTADAEKGATAEKGEKGAPSTDEE
KGATAERKGKKRETAADEKEGAGGDGCGVGGVRRRGSLFLQRRPAAAAAAAGKGKTITLV
SSEGKPFKVSEEAARLSTVLADMIDNGCAGGNIPLPNVTARALVTVIKYCDKHAAAAAAK
PDSDHCAAEGSSTTTSVTAASEKTLAEWDSKLVDKLTLDALYDLLLASNFLDIKGLLGAA
SQKVADIIKSKTPAQVRTIFGITNDFTPEEEEEEVRKENPWAFEDEEP
NT seq 867 nt   +upstreamnt  +downstreamnt
atggcggcggagaagggggagaaggcggcggaggagggagagatgggagtgaaggccgcg
gaggaggagaagggagcggcagcaaaggggaagggagagaagggtgcgactaccgcggat
gcggagaagggagcgacggcggagaagggcgagaagggtgcgccatccacggatgaggag
aagggagctacggcggagaggaagggaaagaagagagaaacggccgcggatgagaaggaa
ggagcagggggcgacggctgcggcgtcggaggcgtccggcgaagaggcagtcttttcctt
cagcgccgccccgccgccgccgccgccgccgccgggaaggggaagacgatcaccctggtg
agctcggaggggaagccgttcaaggtgtcggaggaggcggcgcggctgtcgacggtcctc
gccgacatgatcgacaacggctgcgccggcggcaacatcccgctacccaacgtcaccgcc
agggccctcgtcacggtgatcaagtactgcgacaagcacgccgccgccgccgccgccaag
cccgactccgaccactgcgccgcggagggcagcagcaccaccaccagcgttaccgcggca
tccgagaagacgctggctgagtgggacagcaagctcgtcgacaagctcaccctggacgcc
ctctacgacctcctcctcgcctccaacttcctcgacatcaaggggctcctcggtgccgcc
agccagaaggtcgccgacatcatcaagagcaagacaccggcgcaggtccgcacgatcttc
ggcatcaccaacgacttcaccccggaggaggaggaggaggaggtccgcaaggagaacccc
tgggctttcgaggacgaggagccttga

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