Panicum virgatum (switchgrass): 120662940
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Entry
120662940 CDS
T07260
Name
(RefSeq) SKP1-like protein 1B
KO
K03094
S-phase kinase-associated protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03083
Polycomb repressive complex
pvir04120
Ubiquitin mediated proteolysis
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120662940
04120 Ubiquitin mediated proteolysis
120662940
09126 Chromosome
03083 Polycomb repressive complex
120662940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120662940
04121 Ubiquitin system [BR:
pvir04121
]
120662940
03036 Chromosome and associated proteins [BR:
pvir03036
]
120662940
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
120662940
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
120662940
Cul7 complex
120662940
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
120662940
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
120662940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Motif
Other DBs
NCBI-GeneID:
120662940
NCBI-ProteinID:
XP_039797919
LinkDB
All DBs
Position
2N:66172317..66173191
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AA seq
225 aa
AA seq
DB search
MAAEGEKRGAMEAEKGAVEKGGDVAAASEEGKCVEEAKEVMAGGKMVILRSSQPEKKRYE
VPEAAARLSVILGGMLDGGCTIDDDGVVIPFTARTLDTVFEYCSKHAEATKSDSDHFAAA
ATKSDPNPSAEASVGGVNTAASENLEDWDRKLVDRLSMDDLYDVIHAANFLAIKGLLDVV
YQRAADMIKGKTPDEIRATFNITNDFTEEDEEEFREQYSWIFDVE
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagggagagaagaggggagcgatggaggcagagaagggagcggtggagaag
ggaggggacgttgcggcggcgtcggaggaggggaagtgtgtggaggaagcgaaggaggtg
atggccggcggtaagatggtcatcctgaggagctcgcagccggagaagaagcggtacgag
gtcccggaggcggcggcgcggctgtcggttatcctcggaggaatgctcgacggaggttgc
accatcgacgacgacggcgtcgttatccccttcaccgccaggaccctggacacggtgttc
gagtactgcagcaagcacgccgaggctaccaagtccgactccgaccacttcgccgctgcc
gccaccaagtccgaccctaaccccagcgccgaggccagcgtcggcggtgttaacacggcg
gcgtccgagaacctggaggattgggaccgcaagctcgtcgaccgcctaagcatggacgac
ctctacgacgtcatccacgccgccaacttcctcgccatcaaggggctcctcgacgtcgtc
taccagagggccgccgacatgatcaagggcaagacccctgacgagatccgcgccaccttc
aacatcaccaacgacttcaccgaggaggacgaggaggagtttcgcgagcagtactcctgg
atcttcgacgtcgagtag
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