KEGG   Panicum virgatum (switchgrass): 120662995
Entry
120662995         CDS       T07260                                 
Name
(RefSeq) RNA-binding protein 1-like
  KO
K14411  RNA-binding protein Musashi
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    120662995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvir03019]
    120662995
Messenger RNA biogenesis [BR:pvir03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     120662995
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 120662995
NCBI-ProteinID: XP_039797965
LinkDB
Position
2N:2229600..2233663
AA seq 384 aa
MAAAAQGGAAGPAAGEEEAGESRKLFVGGIPSAAQEAELRAHFARFGEVRSAIVMRDRET
GHGRGFGFVEFEDEAAAAAALGDGDKPRHFICGRMVDVKRARTRAPRNQGEQNSQPQQPE
NGRGQGHQDNQQQPAGHGTADSGNNVSYDSKKVFIGGLRDNITEEEFKAYFETFGTVTDV
VVIYDSLTSRSRGFGFVTFDSEEAVGKVMRQSFHNLNGTKVEAKIAIPKDEQYYRNGRGR
GARPFGSRGPAGYEGSAYQPYNARFGLYNGYIPQPVPAQPYFPAPYFAVGGYPYGSGYPS
QGVMSNVPGMISRLVPPAHGTYPHMYPGFNFVYRAGYGGAATSFQQGINGGSDNKKDQIN
VDMQQVDSTASVTTMLEHMKLGSQ
NT seq 1155 nt   +upstreamnt  +downstreamnt
atggcggctgcggcgcagggcggcgccgcgggcccggcggcgggcgaggaggaggccggc
gagagccgcaagctcttcgtgggcggcatcccgtccgcggcgcaggaggccgagctgcgg
gcgcacttcgcccgcttcggggaggtgcgctccgccatcgtgatgcgggaccgggagacg
ggccacggccgcggcttcggcttcgtcgagttcgaggacgaggccgccgcggccgccgcg
ctcggcgacggggacaagcccaggcacttcatctgcggccggatggttgacgttaagagg
gccaggacaagagctccacggaaccagggcgagcagaactctcagcctcagcagcctgaa
aacggccggggtcaggggcaccaggacaatcagcagcagccggctgggcacggtactgct
gacagcggtaacaatgtgagctatgattcaaagaaggtcttcattggcggcttgcgggat
aatatcaccgaggaggagttcaaggcttactttgagacttttggcactgtaacagatgtt
gtggtgatttatgacagcttgacaagccgctcgagggggttcggttttgtcaccttcgat
tcggaggaagcagtgggaaaggtgatgcgacaaagcttccataacctgaatggaaccaag
gttgaggccaagattgctatccccaaggatgagcagtattaccgtaacggtcgaggccgt
ggggcacgaccctttggcagcaggggccctgctggctatgaaggttctgcataccaacca
tacaatgctagatttggtctttacaatggctacataccacaacctgtgcctgcacagccc
tactttcctgcaccctattttgctgtgggaggctatccgtatggcagtgggtacccaagc
caaggtgtgatgtcaaatgttcctggaatgatatcaaggctggttcctccagcccatgga
acatatcctcatatgtatccagggtttaactttgtatacagagctggttatgggggtgca
gctacttcttttcagcaaggaattaatggtggaagtgataacaaaaaggatcaaatcaat
gtagatatgcagcaagttgacagcactgctagcgttacaacaatgttggaacatatgaag
ctaggttcacaatga

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