Panicum virgatum (switchgrass): 120662996
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Entry
120662996 CDS
T07260
Name
(RefSeq) AP2-like ethylene-responsive transcription factor CRL5 isoform X1
KO
K09285
AP2-like factor, ANT lineage
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120662996
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
AP2/ERF
120662996
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Ortholog
Paralog
GFIT
Motif
Pfam:
AP2
Motif
Other DBs
NCBI-GeneID:
120662996
NCBI-ProteinID:
XP_039797967
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All DBs
Position
2N:2260062..2265163
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AA seq
622 aa
AA seq
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MTNNSSNSNDNGTNAAASGWLGFSLSPHMASAMDDRHHHHVQQQQHQQHGLFFPSVTAAA
AAAAAYGLGAGDAVATSASPYYTPQLASMPLKSDGSLCIMEALRRSDQDHHGPKLEDFLG
AAQSQAMALSLDNAAAASSLYYYGDAGGGGHHHGSSFLQPCADLYGGPSAASLVGDDEAA
AAATAMASWVAARAESGVLSAAGQHQHHHALALSMSSGSLMSSCVAAHPGEYGMVAGAAM
DGGRKRGGAAGGQKQPVHHRKSIDTFGQRTSQYRGVTSRHRWTGRYEAHLWDNSCKKEGQ
TRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLEDYQEELEEMKNMTRQEYVA
HLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVSGNKDLYLGTFSTQEEAAEAYDIAA
IKFRGLNAVTNFDITRYDVDKIMASNTLLPGDLARRKKDGEAPVADDVGGVVTAAAAALV
QAGNGSAADTWKVAAALAAAPRAAEHAHAHHDVLSGAEAFSVLHDLVTAADGGAGAAQHM
PMSSASSLVTSLGNSREASPDRGGGLSMLFSKPPPAQHQAAINNKPMSPLMPLGSWASPV
SARAAASVSIAHMPVFAAWTDA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaatagcagcaacagcaacgacaacggcacaaacgcggcggcgagcggctgg
ttaggcttctcgctgtcgcctcacatggcctccgccatggacgaccgccaccaccaccac
gtccagcaacagcagcatcagcagcatggcctcttcttcccttccgtcactgccgctgcc
gccgcggcggccgcctacggcctcggcgccggcgacgccgtggccaccagcgcgtcgccg
tactacacgccgcagctcgcgtccatgccgctcaagtccgacggctcgctctgcatcatg
gaggcgctccggcgaagcgatcaagatcaccacgggccgaagctcgaggacttcttgggc
gcggcgcagtcgcaggccatggcgctgagcctggacaacgccgccgccgcctcgagcttg
tactactacggcgacgccggcggcgggggccaccaccacgggtcgtcgttcctgcagccg
tgcgccgacctgtacggcgggccctcggcggcctcgctggtgggcgacgacgaggccgcg
gccgccgccacggcgatggcaagctgggtggcggcgcgcgccgagagcggcgtgctgtcc
gccgcggggcagcaccagcaccaccacgcgctggccctgtccatgagctccgggtcgctg
atgtcgagctgcgtggccgcgcaccccggcgagtacggcatggtggccggcgccgcgatg
gacggcgggcggaagcgcggcggcgcggccggcgggcagaagcagcccgtgcaccaccgc
aagtccatcgacacgttcgggcagaggacgtcgcagtaccgcggcgtcacgagcaggcat
aggtggacggggaggtacgaggcgcacctgtgggacaacagctgcaagaaggaaggccag
accaggaagggcaggcaagtttacctcggcgggtacgacatggaggagaaggcggcgaga
gcctacgacctggcggcgctcaagtactgggggccctccacgcacatcaacttcccgctg
gaggactaccaggaggagctggaggagatgaagaacatgacgcggcaggagtacgtggca
cacctcaggaggaagagcagcggtttctcacggggcgcgtccatgtaccggggagtcaca
aggcaccaccagcacgggcggtggcaggcgcgcatcggccgcgtctccggcaacaaggac
ctctacctcggcaccttcagcacgcaggaggaggcggcggaggcgtacgacatcgccgcc
atcaagttccggggcctcaacgccgtcaccaacttcgacatcacgcgctacgacgtcgac
aagatcatggcaagcaacacgctgctccccggcgacctcgcgcgccgcaagaaggacggc
gaggcccccgtcgccgacgacgtcgggggcgtcgtcacggccgccgccgccgcgctagtg
caggccgggaacggcagcgccgcggacacgtggaaggtcgccgcggcgctggcggccgcg
ccgagagcagcggagcacgcccacgcccaccacgacgtgctctccggcgcggaggccttc
tcggtgctgcacgacctggtgaccgccgcggacggcggcgccggcgccgcgcagcacatg
cccatgtccagcgcgtcgtcgctggtgaccagcctcggcaactcgcgcgaggccagcccc
gaccgcggcggcggcctctccatgctcttctccaagccgccgccggcgcagcaccaggcg
gccattaacaataagccgatgagcccgctcatgccgctgggctcctgggcctcgccggtg
tcggccagggccgccgcctccgtgtccatcgcgcacatgcccgtcttcgccgcttggacc
gacgcctga
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