Panicum virgatum (switchgrass): 120663358
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Entry
120663358 CDS
T07260
Name
(RefSeq) calcium-dependent protein kinase 27-like
KO
K13412
calcium-dependent protein kinase [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120663358
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120663358
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120663358
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120663358
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CAMK group
CDPK family
120663358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
EF-hand_1
EF-hand_7
EF-hand_6
PK_Tyr_Ser-Thr
EF-hand_5
EF-hand_8
AIF-1
EH
EF-hand_9
EF_EFCAB10_C
DUF5580_M
APH
Kinase-like
SPARC_Ca_bdg
Kdo
EFhand_Ca_insen
RNA_ligase
tRNA_synt_1c_R1
Motif
Other DBs
NCBI-GeneID:
120663358
NCBI-ProteinID:
XP_039798091
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All DBs
Position
3N:54817421..54819780
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AA seq
615 aa
AA seq
DB search
MGNVCVGNRFSKNRFFGHFSLWPARSRSTGTPSNPTTTSRSIPVVQVQPSESDAKPSPPP
PAAPTAAPAPIVISEPAPAPLPQPQPTPPPSEPDPSPPPPQASQAQQPAAQPQGRQQSRK
KAAHIKRISSAGLQVESVLRRKTENLKDKYSLGRKLGQGQFGTTYLCVDKGTGREYACKS
IAKRKLITDEDVEDVRREIQIMHHLAGHPNIIAIRGAYEDAVAVHVVMELCAGGELFDRI
VRRGHYTERQAAELAKVIVAVVESCHSLGVMHRDLKPENFLFVGNDEESPLKTIDFGLSM
FFRPGEEFMDVVGSPYYVAPEVLKKHYGQEADVWSAGVIIYILLCGVPPFWAETEQGIFE
QVLHGSLDFDSDPWPSVSDNAKDLLRRVLIRDPKKRLTAHQVLCHPWLQTIGSVPDKPLD
SAVLSRLKQFSAMNKLKKMALRVIAENLSEEEIAGLKEMFKMMDTDNSGQINFEELKAGL
ERVGANMKESEIYQLMQAADIDNSGTIDYGEFIAATLHLNKVEKEDHLFAAFQYFDKDGS
GYITADELQQACDEFGIEDVRLEDMIGEVDQDNDGRIDYNEFVAMMQKSTGGFGKKGHQY
NLSIGFRDALKQAHS
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgtctgcgtcggcaaccgcttctccaagaaccgcttcttcggccacttctcg
ctctggcccgcacgctcccgctccaccggcacgccctccaaccccaccaccacctcccgc
tccatccccgtcgtccaggtccagcccagcgagtccgacgccaagccatccccgcccccg
ccggccgcgccgaccgccgctccggcccccatcgtcatctccgagccggcaccggcgccg
cttccccagccgcagccgacgccgccgcccagcgaacccgacccgtcaccgccgccgccg
caggcgtcacaagcacaacaacctgccgcgcagccgcagggccggcagcagtcgcggaag
aaggcggcgcacatcaagcgcatctccagcgccgggctgcaggtggagtcggtgctccgg
cgcaagaccgagaacctcaaggacaagtacagcctggggcggaagctcgggcagggccag
ttcggcacgacgtacctgtgcgtggacaagggcacggggcgggagtacgcgtgcaagtcc
atcgccaagcggaagctgatcaccgacgaggacgtggaggacgtgcggcgggagatccag
atcatgcaccacctggcggggcaccccaacatcattgccatccgcggcgcgtacgaggac
gccgtcgcggtgcacgtcgtcatggagctctgcgccggcggcgagctcttcgaccgcatc
gtgcggcgggggcactacacggagcggcaggcggcggagctggccaaggtcatcgtcgcc
gtcgtggagtcgtgccactcgctcggggtcatgcaccgcgacctcaagcccgagaacttc
ctcttcgtcggcaacgacgaggagtcgccgctcaagaccatcgacttcggcctctccatg
ttcttccgaccaggcgaggagttcatggacgtggtcgggagcccgtactacgtagcgccg
gaggtgctgaagaagcactacgggcaggaggcggacgtgtggagcgccggcgtgatcatc
tacatcctgctctgcggcgtgccgcccttctgggcggagacggagcagggcatcttcgag
caggtgctgcacggctcgctggacttcgactccgacccgtggcccagcgtctcggacaac
gccaaggacctgctgcggagggtgctcatcagggaccccaagaagcgcctcaccgcgcac
caagtcctctgtcacccgtggctgcagaccatcggctcggtgccggacaagccgctggac
tcggcggtgctctcacggctgaagcagttctcggccatgaacaagctcaagaagatggcc
ctcagggtgatcgccgagaacctgtcggaggaggagatcgcggggctcaaggagatgttc
aagatgatggacaccgacaacagcgggcagatcaacttcgaggagctcaaggccggactt
gagagggttggtgccaacatgaaggagtcggagatatatcagctcatgcaggctgctgac
atcgacaacagtggcaccatagattacggagagttcatagcagccacgctgcacctcaac
aaagttgagaaggaggaccatctttttgccgccttccagtacttcgacaaagatggcagt
ggatacatcacggctgatgagctgcagcaagcgtgcgacgagttcggcatagaagatgtc
cggcttgaagacatgatcggcgaagtggatcaagacaacgatgggcgcatagattacaat
gagtttgttgcgatgatgcagaaatcgactggcggctttggcaagaaaggccaccagtac
aaccttagcattgggtttagggatgccttgaagcaggcacatagctga
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