Panicum virgatum (switchgrass): 120663377
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Entry
120663377 CDS
T07260
Name
(RefSeq) regulatory-associated protein of TOR 1-like isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120663377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120663377
Membrane trafficking [BR:
pvir04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
120663377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_EML
Peptidase_C14
Beta-prop_WDR75_1st
Lgl_C
Motif
Other DBs
NCBI-GeneID:
120663377
NCBI-ProteinID:
XP_039798111
LinkDB
All DBs
Position
3N:complement(135014..145634)
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AA seq
1385 aa
AA seq
DB search
MALGDLMASRLVHSSSSPSPSTAAPPAPLPNHHHNHVTDDLPVANGPEPRNGLEPAEVDK
PAPVTYLPQVMVLCEQRHEGIDEAAAAAAGPSTSGLVSKWRPKDRMKTGCVALVLCLNIS
VDPPDVIKISPCARMECWIDPFSMAPPKALANIGKTLHSQYERWQPKARYKLQLDPTVEE
VKKLCNTCRKYARSERVLFHYNGHGVPKPTTNGEIWVFNKSYTQYIPLPITDLDSWLKTP
SIYVFDCSAAGIIVKAFLERLDWSSSSSSSSQKDCILLAACEAHQTLPQSAEFPADVFTA
CLTTPIKMALHWFCKRSLLRGSMDRSLIDQIPGRQNDRKTLLGELNWIFTAITDTIAWNV
LPHDLFQRLFRQDLLVASLFRNFLLAERIMRSANCSPISYPLLPPTHQHHMWDAWDMAAE
ICLSKLPQLIADPNAEFQPSPFFTEQLTAFEVWLDHGSQDKKPPEQLPIVLQVLLSQSHR
FRALVLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTSAMELRQILVFIWTKILSLDKSCQ
VDLVKDGGHTYFIRFLDSLDAYPEQRAMAAFVLAVIVDGHRTGQEACIHAGLIDVCLRHL
QPENPHDAQTEPLLLQWLCLCLGKLWEDFSEAQSLGLQSNAPEILIYLLSEPQPEVQCLH
ISSVLSFASFTIYLLNIWYCQVRASAVFALGNLLDMGSTSSNGVDDDSDDDEKVKAEINV
VRSLLQVSSDGSPLVRCEVAIALTRFALGHNKHLKSVAAEYWKPQTNSLLKSPPSLANIS
SPNNVYSPNNIRQGSSGLASHIGPVLRVGSDSSATCRDGRVSTSSPIATSSIMHGSPQSD
DSSQHSDSGILLRENASNGGLSYTRSRPADSVIYSQYISTMCSVAKDPYPRIATIGRRAL
SLIGVEQVVMKNSRFNSGGAHQGETSAPPSNFGMARSSSWFDMNSGNFSIAFRTPPVSPP
QHDYLTGLRRVCSMEFKPHPMNSPEGLADRLISAAAPSNAELIILPQSTIYNWSCGHFSR
PLLSGSDDNEEAHARREEREQIALDCIAKCQRSSACKMTSQIASWDTRFDSGTKAALLLP
FSPIVIAADENEQIRVWNYDDALPVNSFQNHKLSDRGLSKLLLINELDESLLLAASSDGN
VRIWKNFTQKGGQKLVTAFSSVQGHRAAGRSIVIDWQQQSGCLYASGDMSSILVWDLDKE
QLLSTIQSSGDSAISALSASQVRSGHFAAGFAAGSVRIFDVRSPDRLIYMARPHAPRMEK
VVGIGFQPGLDPYKIVSASQAGDIQFLDVRRAAEPYLTIEAHRGSLTALAVHRHAPVVAS
GSAKQMIKVFSLEGEQLTIIRYQPSFMGQRIGSVNCLSFHPYKSLLAAGAGDNALVSIYA
EENYK
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggagatctcatggcgtccaggctcgtccactcctcgtcctcgccgtcgcca
tcgacggccgcgcccccggcgccgctgccgaatcaccaccacaaccacgtcacggatgac
ctccccgtcgccaacggcccggagcccaggaatgggctggagcccgccgaggtggacaag
ccggcgcccgtgacgtacctgccccaggtgatggtgctgtgcgagcagcgccacgagggg
atcgacgaggctgcggccgccgccgccgggccctccaccagcggccttgtctccaagtgg
cgcccaaaggaccggatgaagacaggatgtgttgcacttgtattatgtttaaacattagt
gttgatccaccagatgtaattaaaatctccccttgcgcaagaatggagtgctggatagat
ccattttctatggcacctcctaaggcccttgcaaatattggaaaaacattgcactcacag
tatgagcgctggcaacctaaggctcgttacaagcttcagctagatccaactgtggaggaa
gttaaaaagctttgtaatacttgtcgcaaatatgccagatcagagagagtccttttccat
tacaatggccatggtgtaccaaagcctacaactaatggtgagatttgggtgtttaacaag
agttacacacagtatattccacttccaattactgatcttgattcttggctaaaaacacct
tccatttatgtttttgactgctcagcagctggaattattgtgaaagcttttctagagcgc
ctagactggagttctagctcctcttcatcttcgcagaaggattgcattcttcttgctgcc
tgcgaagcacatcaaactcttccccagagtgcagaatttcctgctgatgtgtttacagct
tgcctcacaacacccatcaagatggcattgcactggttttgtaagagatcattactccgt
ggttctatggatcgttctcttattgaccaaattcctggaaggcaaaatgaccgtaaaact
cttcttggagaactgaattggatttttactgccattacagatactattgcatggaatgtg
cttcctcatgatctattccaaaggctattcaggcaagatcttctggttgctagtctcttt
cgtaacttcttgcttgctgagagaatcatgcgatccgcaaattgttctccaatttcttat
ccgttgttaccaccgacccatcaacaccatatgtgggacgcatgggacatggctgctgag
atttgcctttccaagcttcctcagttaattgctgatccaaatgcagagtttcagccgagc
ccttttttcacggaacaactgacggcttttgaagtgtggcttgatcatggttctcaggac
aagaagccccctgaacagttacctatagttcttcaggtcctgcttagtcaatcgcataga
tttagagcgcttgttttgcttggaagatttcttgacatgggaccatgggcagttgatttg
gccctgtctgttggaatatttccttatgtgctcaaactgcttcaaacaagtgcaatggag
ttgcgtcaaattcttgttttcatatggacaaaaattctctctcttgataagtcgtgccag
gttgacttggttaaagatggaggacatacatattttatcagatttcttgacagtttggat
gcttacccagagcagcgtgcaatggccgctttcgttttagcagttattgtggatgggcat
aggacaggtcaagaggcctgtattcatgcaggtcttatagatgtttgtctgagacatctg
caacctgaaaatccccatgatgcacagacagagcctttgcttttgcagtggctttgttta
tgccttggcaaactctgggaagatttttctgaggctcagtcacttggtctgcaatcaaat
gcaccagaaattttaatttatttgttatcggagccacaacctgaggtacaatgccttcat
atttcatctgttctttcatttgcttccttcacaatatatttattaaatatttggtattgc
caggtcagagcttctgctgtttttgcacttgggaatctcctggatatgggatcaacatca
tcaaatggtgttgatgatgattctgatgatgatgaaaaagtaaaagctgaaataaatgtc
gttcgaagccttctgcaggtctcttcagatggtagcccccttgttagatgtgaggttgct
atagcgcttactcgttttgcattgggtcacaataagcatctcaaatctgttgctgctgag
tattggaaacctcaaaccaattcattgctgaagtcaccaccatcactggccaatataagt
agtccaaacaatgtctacagtcccaacaacattcgacaaggcagcagtggccttgcttct
catattggtcctgtgctaagggttggcagtgatagcagtgccacttgtcgtgatggaagg
gtttctacgagcagcccgattgcaacaagtagcatcatgcatggctctccccagtcagat
gattcttcccaacactctgattcaggcatattactgagagagaatgcaagtaatggtggc
ctcagctatactagatcgaggcctgctgacagtgtcatttattctcaatatatatcaact
atgtgttctgttgctaaagatccttacccaagaattgcaactattggccggagagcactg
tcccttataggtgttgagcaagtggtcatgaaaaacagtagatttaacagtggaggtgca
catcaaggagagacatctgcacctccatcaaactttggaatggcacgctcttcttcctgg
tttgatatgaattctggaaacttctcaattgcatttaggacgcctcctgttagcccccct
caacatgattatcttacaggattacgccgagtatgttcaatggagttcaaaccacatcct
atgaattctcctgagggcttagctgatcgccttatctctgctgcggctcccagtaatgct
gaactaatcatacttccccaatcaacaatttacaactggagttgtggacacttctctagg
ccacttttatctggttctgatgataacgaagaagcccatgctagaagagaagagagagaa
caaattgcactagattgcattgctaagtgccagcgatcatcagcttgcaagatgacaagc
caaattgctagttgggatacaaggtttgattcaggtacaaaagcagcattattgttgcca
ttttctccaatcgtcatcgcagctgatgaaaatgaacaaataagagtgtggaactacgat
gatgcactaccagtgaactcttttcaaaaccataaattgtccgacagagggctatcaaaa
ctcttgcttatcaatgagcttgatgagagcttgcttttagctgcctcaagtgatggaaat
gtacgtatatggaaaaattttactcaaaagggaggacaaaaacttgtaactgctttctca
tcggttcagggtcatcgagctgctggtcgcagtattgtgatcgattggcagcagcaatct
ggttgcctgtatgcatctggtgacatgtcttccatcttggtatgggatcttgacaaggaa
caacttctaagcaccattcagtcatctggtgacagtgcaatttctgccctgtctgcatct
caggtccgctctggacactttgctgctggttttgctgctggttctgtaaggatatttgat
gttcgctctcctgataggctgatctatatggcaaggccacatgccccaagaatggaaaag
gttgtgggcatagggtttcagcctgggcttgatccatacaagattgtaagtgcatctcaa
gctggagacattcagtttctcgatgttagaagggcagcagaaccctacctgactattgag
gcacacaggggttcacttactgctttagctgttcatcggcatgccccagttgttgctagt
ggctcagccaagcagatgattaaagtgttcagtcttgaaggagagcagttgacgataatt
cgctaccagccatcatttatgggccaaagaataggcagtgtaaactgcctttctttccac
ccgtacaaatcactcttggccgctggtgctggtgataatgctcttgtctctatctacgcc
gaggaaaattacaagtaa
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