Panicum virgatum (switchgrass): 120663428
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Entry
120663428 CDS
T07260
Name
(RefSeq) protein SCARECROW-like
KO
K27742
protein SCARECROW
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120663428
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
GRAS
120663428
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Gene cluster
GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
120663428
NCBI-ProteinID:
XP_039798177
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All DBs
Position
3N:536900..546256
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AA seq
678 aa
AA seq
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MGSSSLLLFPSSSSAAPPPHSAVYSHATTSSHSLLPPLPSSQDHLLLHYLHHHQDQQHQE
SAAAAAMVRKRPAPDMDLPPPRRHIMGDLSDVTAAAFRPAPPEPPLLMAIQSAASAQLPA
QPTQLQHPAFEQQQHHHAHAEVDVPHAPPPAPAEVAASTTAWVDGIIRDIIGISGGAGVS
ITQLIHNVREIIHPCNPGLASLLEPRLRSLLNADPAPPPLPHPPALLHGSTPPAAAPTVP
PALPPPPPLPVPDKRRHEPQQEEPNPSPQSPKAPTAEETAAAAAAAAAGAAKERKEEQRR
KQRDEEGLHLLTLLLQCAESVNADNLDDAHLTLLEIAELATPFGTSTQRVAAYFAEAMSA
RLVSSCLGLYAPLPAASPAAARLHGRVAAAFQVFNGISPLVKFSHFTANQAIQEAFEREE
RVHIIDLDIMQGLHWPGLFHILASRPGGPPRVRLTGLGASMEALEATGERLSDFADTLGL
PFEFCAVAEKAGNVDPEKLGVTRREAVAVHWLHHSLYDVTGNDSNTLWLIQRLAPKVVTM
VEQDLSHSGSFLACFVEAIHYYSALFDSLDASYGKDSPERHVVEQQLLSREICNVLAVGG
LARTGDVKFGSWREKLAQSGFHSVSLACSAAAQASLLLSMFPSFGYTLVEENGALKLEWK
DLCLLTASAWRPIQTPCR
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgggctcttcgtccctcctgctcttcccctcgtcctcctcggccgcgccaccccctcac
tctgctgtttattcccatgccaccacctcctcccactccttattgccgccgctcccctcc
tcccaggaccacctcctcctccactacctccaccaccaccaagaccagcagcaccaggaa
tccgccgccgccgccgccatggtccgcaagcgcccggcgcccgacatggaccttcccccg
ccgcgccgccacatcatgggcgacctctccgacgtcactgccgccgcttttcggcccgct
cctcccgagccgccgctcctcatggcgattcagtcggcagctagcgcgcagctgcccgcg
cagcccacccagctccagcaccccgcgttcgagcagcagcagcaccaccacgcgcacgcg
gaggtggacgtcccccacgcgcccccgcctgcgccggccgaggtggcggcgtccaccacg
gcgtgggtggacggcatcatccgcgacatcatcggcatcagcggcggcgccggggtctcc
atcacgcagctcatccacaacgtccgcgagatcatccacccctgcaaccccggcctcgcc
tccctcctcgagccccgcctccgctccctcctcaacgccgaccccgccccgccgccgctc
ccgcatcctcccgccctcctgcacggcagcaccccgcccgccgccgccccaacagtgccc
cccgctctccctccccctcccccgcttccggttccagacaagcgccgccacgagccgcag
caggaggagccgaacccgtcgccgcagtcgcccaaggctccgacggcggaggagaccgcc
gcggcagccgccgccgcggctgccggggccgccaaggagcggaaggaagagcagcggcgg
aagcagcgcgacgaggagggcctccacctgctgacgctgctgctgcagtgcgccgagtcg
gtgaacgcggacaacctcgacgacgcgcacctgacgctgctggagatcgcggagctcgcc
acgcccttcggcacctccacgcagcgcgtcgccgcctacttcgcggaggccatgtccgcg
cgcctcgtcagctcgtgcctcggcctgtacgcgccgctaccggcggcgtcccccgcggcg
gcgcgcctgcacggccgcgtcgccgccgcgttccaggtgttcaacggcatcagccccctg
gtgaagttctcgcacttcacggcgaaccaggccatccaggaggcattcgagcgggaggag
cgcgtccacatcatagacctcgacatcatgcaggggctgcactggccgggcctcttccac
atcctcgcctcccgccccggcggcccgcccagggtcaggctcaccggcctcggcgcgtcc
atggaggcgctcgaggccacgggggagcgcctctccgacttcgccgacacgctcggcctg
ccattcgagttctgcgccgtcgcggagaaggccggcaatgtcgacccggagaagctgggc
gtcacgcggcgcgaggccgtcgccgtccactggctccaccactcgctctacgacgtcacc
ggcaacgactccaacacgctctggctcatccaaaggctggcccccaaggtggtgacaatg
gtggagcaggacctcagccactcgggctccttcctggcgtgcttcgtggaggccatccac
tactactcggcgctgttcgactcgctggacgcgagctacggcaaggacagcccggagcgg
cacgtcgtggagcagcagctcctatcgagggagatctgcaacgtgctcgccgtgggcggg
ctggcgcgcaccggcgacgtcaagttcgggagctggcgcgagaagctcgcacagtcgggg
ttccactcggtgtcgctcgcctgcagcgcggcggcgcaggcgtcgctgctgctcagcatg
ttcccctccttcgggtacacgctcgtcgaggagaatggtgctctcaagcttgagtggaag
gatctttgcctgctcactgcatctgcttggcgcccgattcagaccccatgccgttaa
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