Panicum virgatum (switchgrass): 120663433
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Entry
120663433 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 7 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120663433
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120663433
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120663433
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120663433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
120663433
NCBI-ProteinID:
XP_039798182
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Position
3N:complement(602090..607084)
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AA seq
641 aa
AA seq
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MKGHQQQPHSSPLLLPPNKRRCTALAAAVPALVVCSILLPLVFLLGLHRPGYGSEERAAV
VISTKLNGVGARNKQHLENGAAMKHKLLKDVSKKNSGSNGIPVEKSTRSKSKAKLKGAFS
LVELNNNTFKSKGPHMPKRYQRKDLSWRSKDTVVNGKENHGEETVHEGNPTSCEHEYGSY
CLWSTEHREIMKDAIVKRLKDQLFIARAHYPSIAKIKQHERFTRELKQSIQEHERMLSDT
ITDADLPPIFAKKLEKMEHTIERAKSCEVGCSNVERKLRQLLDMTEDEAYFHTRQSAILY
HLGVQTMPKTHHCLNMRLTLEYFKSRSISTDQLNRQKLESPAFQHYVIFSRNVLAVSTTI
NSTVLNCQDSGSIVFHLFTDAQNFYAMKHWFERNSYLEATVHVTNIEDHPELPKHAEMQK
LLPSEEFRVTIRNYSEPSLRQMKTDYISVFGHSHFVLPDLLPSLNRVFVLDDDLIVQKDL
SSLWNLNMDGKVIGAVQFCGVKLGHLRAYISEHNFNSDACVWLSGLNVIELEKWRDLRVT
SLYVQSLQKLQKESLTSKRLKALPVSLLAFQDLIYPLKDSWVQSGLGHDYGISRDHIEKA
ATLHYSGVMKPWLDLGIHDYKSYWRKYMTTGETFMTECNIH
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggcaccagcagcagccgcattcctctcccctgttgctgccgcccaataagcgc
cgctgcaccgccctcgccgccgccgtcccggcgctcgtcgtctgctccatcctgctcccg
ctcgtcttcctcctcggcctccaccgccccggctatggatcggaggagcgcgccgcggtc
gtcatcagcaccaagttgaacggtgtcggggcgcgtaacaagcagcatctggagaatggg
gccgccatgaagcacaagctgctcaaggatgtttccaaaaagaattctgggtctaacggg
atcccggttgagaaatctactagatcaaaatcaaaagcaaagctcaagggtgctttctct
ttagttgagctaaataataacaccttcaaaagtaaaggacctcatatgccgaaaagatat
caaaggaaggacctgtcctggagatcaaaggatactgttgttaatgggaaagagaaccat
ggagaagagacagtgcatgaggggaatcccacgtcctgtgaacatgaatatggaagttac
tgcctctggtctacggagcatagggaaattatgaaagatgctattgtgaagaggcttaaa
gatcaactttttattgcaagagctcattatcctagtattgctaaaataaagcagcacgaa
agatttacccgtgaactgaagcaaagcattcaagaacatgaacgcatgctgagtgacacc
atcacagatgccgatctgccaccaatttttgcaaagaagctagagaaaatggagcacacg
attgagagagctaaatcttgtgaagtaggatgctctaatgttgaacggaaacttaggcag
ctacttgatatgactgaagatgaagcttatttccatacaagacagagtgcaattttatat
catcttggtgtccagactatgccgaaaactcatcattgcttgaacatgagattgacatta
gaatatttcaaatcaagatcaattagcactgaccaactaaataggcagaagcttgaaagt
cctgccttccagcactatgtaatattttccagaaacgtacttgcagtttcaaccactatt
aattcaacagttttaaattgccaggattctggcagcattgttttccatttgttcactgat
gcgcaaaatttttatgccatgaagcattggtttgagagaaattcgtacttggaggcaact
gttcatgtaactaacattgaggatcatccggagctcccgaagcatgcagagatgcaaaaa
ttattaccttcagaggaattccgtgtcacaattcgtaattattctgaaccttccctgagg
cagatgaaaactgactacatatctgtttttggccattcacatttcgtgttgcctgacctt
cttccgagtttgaatagagtatttgttctggatgatgatttgattgtccagaaagacttg
tcatctctgtggaacctcaatatggatggtaaagtgattggtgctgtccagttctgtggt
gttaaattaggacatttaagagcttatatttctgaacataatttcaactctgatgcatgt
gtgtggttgtctggtctgaatgtcattgaattggaaaaatggagggacctccgtgtcacc
agtttgtatgttcaatcactccaaaagttgcaaaaggagagcctgacatcaaagagactg
aaagcactccctgttagtctgcttgcctttcaagatctgatataccccttgaaggactca
tgggttcagtcaggccttggacatgattatggaattagtcgagaccatatagaaaaggct
gctactctacactacagtggtgtcatgaaaccttggcttgatttggggatacacgattac
aaaagctactggaggaagtacatgactacaggagagacgttcatgacggaatgcaacatt
cactaa
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