Panicum virgatum (switchgrass): 120663545
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Entry
120663545 CDS
T07260
Name
(RefSeq) probable ribose-5-phosphate isomerase 3, chloroplastic
KO
K01807
ribose 5-phosphate isomerase A [EC:
5.3.1.6
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00030
Pentose phosphate pathway
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
pvir_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
pvir_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pvir_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
120663545
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120663545
Enzymes [BR:
pvir01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.6 ribose-5-phosphate isomerase
120663545
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Motif
Pfam:
Rib_5-P_isom_A
DeoRC
Motif
Other DBs
NCBI-GeneID:
120663545
NCBI-ProteinID:
XP_039798338
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Position
2K:complement(6091289..6094972)
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AA seq
272 aa
AA seq
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MAATAISARLHPAAARPVAAARRARLGVVRALSAPPAAALTQDDLKRLAAVRAVESVQSG
MVLGLGTGSTAAFAVAEIGALFASGKLEKIVGVPTSKRTFEQAQSLGIPLSTLDDHPHID
LAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVIVDETKLVDGLGGSGLAMPVEV
VQFCWKYNLVRLQELFKEEGVEAKLRLEGDKPYVTDNSNYIVDLYFKTPIEDALAAGTQI
AALEGVVDHGLFLNMASSVIIAGSDGVSVKTK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccgctatctccgcccgcctccacccggccgccgcgcgccccgtggccgcg
gcgcggcgcgcccgcctcggcgtcgtgcgcgcgctgtccgcgccgccggcggcggcgctg
acgcaggacgacctcaagcgcctggcggcggtgcgcgcggtggagtcggtgcagagcggg
atggtgctggggctcgggacggggtccacggccgccttcgccgtcgccgagatcggcgcg
ctcttcgcctccggcaagctcgagaagatcgtcggcgtgcccacctccaagcgcaccttc
gagcaggcgcagtcgctcggcatcccgctctccacgctcgacgaccacccgcacatcgac
ctcgccatcgacggcgccgacgaggttgacccagaccttaaccttgtgaaagggcggggt
ggtgctcttctccgtgagaagatggttgaggctgcatcagacaagtttattgttattgtt
gatgagacaaaacttgttgatggattaggaggaagtggtctagctatgccagtggaggtt
gtgcagttctgctggaagtacaacctagtaagattgcaggaactgtttaaggaggaagga
gtcgaggcaaagctaagattggaaggtgacaagccttatgttactgacaactcaaactac
attgtcgatttatacttcaagacgccaattgaggatgcattggcagcagggacacagatc
gcagctttggaaggagttgttgaccatgggttgttcttgaacatggcaagttcagtgatc
atcgctggatcagatggtgtcagtgtcaaaacgaagtga
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