KEGG   Panicum virgatum (switchgrass): 120663612
Entry
120663612         CDS       T07260                                 
Name
(RefSeq) replication protein A 32 kDa subunit A-like
  KO
K10739  replication factor A2
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03030  DNA replication
pvir03420  Nucleotide excision repair
pvir03430  Mismatch repair
pvir03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120663612
   03420 Nucleotide excision repair
    120663612
   03430 Mismatch repair
    120663612
   03440 Homologous recombination
    120663612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvir03032]
    120663612
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120663612
DNA replication proteins [BR:pvir03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    120663612
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     120663612
   MMR (mismatch excision repair)
     120663612
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     120663612
SSDB
Motif
Pfam: RPA_C RMI2 tRNA_anti-codon
Other DBs
NCBI-GeneID: 120663612
NCBI-ProteinID: XP_039798409
LinkDB
Position
3N:1986313..1988929
AA seq 278 aa
MMPSSQPDFSPSQFTSSQNAAADSTTPSKMRGASSTMPLTVKQIADAHQSGTGEKGAPFV
VDGVETANIRLVGMVNGKAERTTDVSFTLDDGTGRLDFIRWVNDASDSSETAAIQNGMYV
SVIGSLKGLQERKHATAFAIRPITDFNEVTLHFIQCVRMHVENTKLKVGSPARTSSSMGA
SVSNGFSESSTPASLKSNPAPVTSGASGTDGTDLNTQVLNIFREPANIESEHGVHIDEII
KRFKLPENKIREAIMYNADVGHIYSTIDDFHYKSAFTD
NT seq 837 nt   +upstreamnt  +downstreamnt
atgatgccctcgagccagcccgatttttcgccgtcgcagttcacctcctcccagaatgcc
gccgccgactccaccaccccttccaagatgcggggcgcatcaagcactatgccactcacc
gtcaagcagatcgccgacgcgcatcaatctggcaccggcgagaagggcgctcccttcgtc
gtcgatggcgtagagacggctaatattcgacttgtggggatggtcaatggcaaagcagag
cggacgacagatgtgtcattcacgctcgatgacggcactggtcgcctcgatttcattaga
tgggtgaatgacgcttcagattcgtctgaaactgctgctattcagaatggtatgtatgtc
tcggtgattggtagtctcaagggacttcaagagaggaagcacgctactgctttcgcaatc
aggcctataactgatttcaatgaggttacgctgcatttcattcaatgtgttcggatgcac
gtagagaatactaaattaaaggtaggcagtcctgcacgaaccagttcttctatgggagca
tcagtttcaaatggattcagtgaatcaagcacaccagcatcattgaaatctaatccagca
ccggtgaccagtggtgcaagtggaaccgacgggactgatttaaacacacaggtgctgaat
attttccgcgaaccagccaacattgagagtgagcatggggtgcacattgatgaaataatc
aagcggttcaaattgcctgagaataagataagggaggcaattatgtataatgcggatgtc
gggcatatttactcaacaatcgatgattttcactacaagtcagctttcaccgactga

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